LOC110495646 (LOC106575584)


Basic Information

Item Value
gene id LOC110495646
gene name LOC106575584
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15804179 ~ 15808486 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021570983.2
CAGCGGTTGATGAATAGAAAACACAGCACATTGTTGTTTACAAAGGTATCTACTACATAGCGTAAACCCGCTAGGCTGAAGCAGACAGACGTTTTAACATTTCTTTGATAAAACAAACAGCTAGACTGTTATTGCCCTCGCCAATATGTCCAAACTACAGTTGCTGAATGTGTTCGTTACCGAGCGTTTGTCTGCGGCTGCTGTGGAGATATTCGGGGCTGTAGAGAAGACTATAGCAGAGTATCGGGAAGAAATCTTCCGTTCAGCAGAGGAGAACGAGCGTCTACGGAGGGAGATGGACATGATTATCAAATCAGAGATACAGTTATACAGAACAGacttcCAGCAACTCActccctctgttccccctgaGCAGCAGAAGTGTGAGCAGGAGTGGAGCCCCAGTCTGGGGCAGGAGGACCCAGAGCCCAcacagattaaagaggaacaTCAGGAGTTCAGACTCAGTCAGGAGGACCCACCTCAGCCCTCACGTCTTTACCAAAAACAAACTGTGGATGACAGCGAGAGGAGCGCTCTACCTATCATCAtaactgaagacatcaaaacagaACCTGATGGAGAGGGCTACAGAGTACCACAACCAACCAGTGATCAGCCCCTCTCAGTTCATCCAGACTGCTCTGCTACACTGGAAAAACCATATTGGTGTAAACAATGTGGCAAAAGCTTTACACGTAAGGGAAACTTGACCTTGCATTTAaagatacacacaggagagaaaccttttctgtgcaaacaatgtggcaaaaggtttaACCAGAAGAGCAACTTGACCAtccacacaaggacacacacaggagagaatccCTATCAGTGCAaacaatgtggcaaaaggtttaACCATAAGAGCAACTTGACCAGCCATACaaggatacacacaggagagaatctGTATCAATGTAAAGCTATTTAAGACTTCATCAGTGTGTTCACACGGGAGAAATCTAACCAGTGCAAATAATGTGGCAAAAGCTTTGGTTATAAACAGCCATACATCACATATGAGCACTCACATTAAAGGGCATACATTATATTACTGCAGTGAGTACAGCAAAAGCTTCAGCCTGAAGTGAAAGTGAAAACAACAAATGATACTTTGTATCATAGTGGATTACTTCTCACATCCAACTTGTAAATTAATGTTATGTTCTGTTTTCTGGCACTTGACAACAAAACAAATTGAGTTGTGAAAATCAGTATGAAAATCATCAGTCAGTATTAGACTTCTTAGCTGAAACTAGCTCTCAATTTCAgagacctacagtgcattcggaaagtaatcagaccccttgactttttccattttgttatgttacagccttattctaaaattgattaaatagttttttttctctcattaatctacacacaataccccat

Function

NR:

description
zinc finger protein 135-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021570983.2 True 1404 mRNA 0.42 2 15804179 15808486

Neighbor

gene id symbol gene type direction distance location
LOC110495644 LOC106575583 coding upstream 2391 15796262 ~ 15801788 (+)
LOC110495643 LOC106575583 coding upstream 8500 15775465 ~ 15795679 (+)
LOC110495645 LOC106575584 coding upstream 9485 15791145 ~ 15794694 (+)
LOC110495642 LOC106574719 coding upstream 54542 15734320 ~ 15749637 (+)
LOC110495640 LOC106599837 coding upstream 73349 15723707 ~ 15730830 (+)
LOC110495647 NA coding downstream 9011 15817497 ~ 15820461 (+)
LOC110495648 LOC106575580 coding downstream 17362 15825848 ~ 15841645 (+)
LOC110495650 LOC106575578 coding downstream 38882 15847368 ~ 15852257 (+)
LOC110495649 LOC106574731 coding downstream 44158 15852644 ~ 15865039 (+)
LOC110495654 LOC106575575 coding downstream 185127 15993613 ~ 15996859 (+)
LOC110495637 LOC106575461 non-coding upstream 129517 15622187 ~ 15674929 (+)
G1520560 NA non-coding upstream 172094 15577484 ~ 15632085 (+)
LOC110495451 fbx36 non-coding upstream 189503 15603978 ~ 15615215 (+)
G1520565 NA non-coding upstream 197361 15590725 ~ 15606818 (+)
LOC110495448 LOC106575529 non-coding upstream 241865 15554859 ~ 15563239 (+)
G1520677 NA non-coding downstream 16241 15824727 ~ 15825140 (+)
G1520691 NA non-coding downstream 61248 15869734 ~ 15870666 (+)
G1520697 NA non-coding downstream 67665 15876151 ~ 15878418 (+)
G1520704 LOC106595378 non-coding downstream 77856 15886342 ~ 15893668 (+)
G1520705 NA non-coding downstream 78699 15887185 ~ 15887551 (+)
LOC110495440 LOC106575601 other upstream 587935 15207355 ~ 15251952 (+)
il8r il8r other upstream 904007 14898154 ~ 14901354 (+)
G1519733 NA other upstream 989293 14813982 ~ 14814886 (+)
LOC110495481 LOC106574739 other upstream 1246833 14556326 ~ 14558589 (+)
G1520742 NA other downstream 110671 15919157 ~ 15922899 (+)
G1520748 NA other downstream 129744 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 657027 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1815330 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1957733 17766219 ~ 17766694 (+)

Expression


Co-expression Network