LOC110495647


Basic Information

Item Value
gene id LOC110495647
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 15817497 ~ 15820461 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002469459.2
TTGCGTTGTGTAAATAGCACACCGTCCATCGTTGTTTACATATGTTCTAGATTAGATCTGCTAGGCCAAATCAGACAGAGAAATTTCAAAATGTCTTTGATCGCCAATATGTCAAAACTACAGTTGTTAAATGTGTTCGTCACCGAGCGTTTATCCGCGGCTGCTGTGGAGATATTCGGGGCCGTAGAGAAGACCATTGCAGAGTTTCAGGAACTAATCTCCTGTTCAGCAGAGGAGAACGAGGGTCTACGGAGACTGTTGGCCATGGTTATCAAACCAGAGATAAAGTTACACAGAGTTGCTACTCACTCCAGCCGTTCCCCTTGAGCAGCAGAACTGTGAGCAGGAGTGGAGCCCCAGTCTGGGGCAGGAGGACCCAGAACCCACACAGATTAAAGAGGAGCTCATACTCAGTCAGGAGCCTTCACCTCAGCCTTCACATCTTTACCAAAACCAAACTGtggatgatggagagaggagcTCTTCATAACTGAAGAGATCAAAACAGAACCTGATGGAGAGGACTACAGAGTACCACAACCAACCAGTGATCAGCCCCACTCAGTTCATCCAGACTGCTCTGCTGCAGTGGAGAAACTATATCAGTGTAAACAATGTGGCAACAGCTTCACACGTAAGGGACACTTGACCATCCATTCaaggatacacacaggagagaaatcttatctGTGCAAACAATGTGGCAAAAGCTTCACCCAGAAAGGTGACTTGGACAGACATACAaggatacacacaggggagagatCTTTTCAGTGTGAAGACAGTGGCAAAGCTTTCAACCAGAAGATAGAATTGACATTGCATATGAGAGTTCATAGAGGACAGAGACCATACAGCTGTCCTGATTGCAGGAAAAGTTACATGGAATTAAGCCATTTAAGACGTCATCAGAGcgttcacacaggggagaaacttCATCCGTGCAAAGAATGTGACAAATGCTTTAGTTATAAAGGAAGCTTGAAGTTGCATATGAGCACTCACGCAAAAGGGATACATAATATCCCTGCAATGAGTGCAGCAAGTGGATCTGAAGTGAAAACAACAATTTATACTTTATCATTGTGGATTTCTTGTTACATCCAACTTTAAATTAATGTTCTATTTTCTGGCACTAGACAAAAAAGCGaattgagttgtgtgtgtgtggagggggaagCATCACTCAGTGTCAGCTTTTTAAGGTGAATCTAGCTCTCACTTTCAGGgacctaccctccaggacactgCTGGCTTCAGGAAGTCCTCACCACTGTATCTAGCACAGAGCACACACTTGGATTTCTAAACAACAGGAGTTCCTATTCAATTGTTTAACAATGACATACAGGATATTTGGGCCACTATCTTCTATCTGTACTGATGGCTGCATGTTAGAATATTGAAGTAGCTCATCACATCTGTATTGACTCAATACAGCAAATAATTTGTTTTAATAAAGTAGTTTTTTCAATGGATGTCATAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002469459.2 True 1487 mRNA 0.43 2 15817497 15820461

Neighbor

gene id symbol gene type direction distance location
LOC110495646 LOC106575584 coding upstream 9011 15804179 ~ 15808486 (+)
LOC110495644 LOC106575583 coding upstream 15709 15796262 ~ 15801788 (+)
LOC110495643 LOC106575583 coding upstream 21818 15775465 ~ 15795679 (+)
LOC110495645 LOC106575584 coding upstream 22803 15791145 ~ 15794694 (+)
LOC110495642 LOC106574719 coding upstream 67860 15734320 ~ 15749637 (+)
LOC110495648 LOC106575580 coding downstream 5387 15825848 ~ 15841645 (+)
LOC110495650 LOC106575578 coding downstream 26907 15847368 ~ 15852257 (+)
LOC110495649 LOC106574731 coding downstream 32183 15852644 ~ 15865039 (+)
LOC110495654 LOC106575575 coding downstream 173152 15993613 ~ 15996859 (+)
LOC110495655 LOC106574721 coding downstream 189314 16009775 ~ 16021896 (+)
LOC110495637 LOC106575461 non-coding upstream 142835 15622187 ~ 15674929 (+)
G1520560 NA non-coding upstream 185412 15577484 ~ 15632085 (+)
LOC110495451 fbx36 non-coding upstream 202821 15603978 ~ 15615215 (+)
G1520565 NA non-coding upstream 210679 15590725 ~ 15606818 (+)
LOC110495448 LOC106575529 non-coding upstream 255183 15554859 ~ 15563239 (+)
G1520677 NA non-coding downstream 4266 15824727 ~ 15825140 (+)
G1520691 NA non-coding downstream 49273 15869734 ~ 15870666 (+)
G1520697 NA non-coding downstream 55690 15876151 ~ 15878418 (+)
G1520704 LOC106595378 non-coding downstream 65881 15886342 ~ 15893668 (+)
G1520705 NA non-coding downstream 66724 15887185 ~ 15887551 (+)
G1520649 NA other upstream 1492 15756493 ~ 15816005 (+)
LOC110495440 LOC106575601 other upstream 601253 15207355 ~ 15251952 (+)
il8r il8r other upstream 917325 14898154 ~ 14901354 (+)
G1519733 NA other upstream 1002611 14813982 ~ 14814886 (+)
G1520742 NA other downstream 98696 15919157 ~ 15922899 (+)
G1520748 NA other downstream 117769 15938230 ~ 15938818 (+)
LOC110495674 LOC106575504 other downstream 645052 16454118 ~ 16468453 (+)
LOC110527374 LOC106592210 other downstream 1803355 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1945758 17766219 ~ 17766694 (+)

Expression


Co-expression Network