LOC110495673


Basic Information

Item Value
gene id LOC110495673
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 16427597 ~ 16431410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036952032.1
cgtcatccgggtttggccggggtaggccgtcattgtaaataagaatttgttcttaactggcttgcctagttaaataaaggttacatttcattttttaTAGTTTGGGGTCTGCTAGACAACAGCAAGGAacatctcctttctctcctctcagcctTTCCAGATGCTAATCATGAGTACACAGTAACTGTAATCTGCATAAGGAGGTGTTgatgtgggatcttatatagccTAAACCTTGTACAGTTAGACGTGTTTAGTTTAGGTCTGGTTCCTAATTTTCCAACTCCCTGTGGTCCTTTTCGCTGACTAAAGTAAACAGATAACAGTTGAGAAAAAGtgtcatgtggtgtgtgtgtgtctatgtgtgtgtgtgtatgttgggaAAGTGGCTGTCATTAACATTTTAATTACCACAAATACCAGCGATAGCACAACAATTGACGCGTGAGTGGGAGAGGTGGAGACTCTTGTGACTTTTAAGCGCACCTAGGTGCAATCGCGCTACAGGCAGCGACACAGAGAGAGGCCCAAATGGAGACAGCAACGTTGCAGTACAGTCCCATGGAGCACCAAACAGAAGCACTGAAGTTGCTACAGAATGTGCGCTCTCACCAAACAGCGATCAGTAGGCCCAGTAAACTTGGACTAGAAAAACAAGTGACAACCATCCACGACTCGTCAGCAGCGGCCCGCACAATAGCAGAAAAGGCGCGTGAAAGTGTCATTACGCAGCTAATCGATATTCTAACCCAAATACTCACAGTCGAGGAAGAAATCAGTCATAGTTTGTTTCAGGATCTGAGGACATTTCTGCACCCTAAAGAAAGCATAGAGCTGAGGAACATCTGTGTGCGCATGGCAGTGAGGGACTCTGACTGTCAGAAGGACCGGGACCTTAGAGATCTGCAGGACTGTTTAAAAGCCATGGTGGACAGTCTGGTGTCTTCTCTCATCAACGTGAACCATCCCGTGGCCGTTCAGACATCACGCACGCTTGAAGAGATATATCTGAGCTTCCCTGAAATCTGAATAGCTAATATCTCACTTTACCTAATCTCAGGGTTGATAGCCTATTGTTTACTTGAATGTacattttaaataatttattttatttcaaattATTGGAGGTGCAACTATGTAGGCCTCCTTTGTAAAAAGGAATGTCAGAAGAAATGATACTGGGACAAACATGTGTGTTATGCAAAGTGTTTTATACAAATCCTCCTTAAAGGCCTGAAGTTTCTGTCAGTTTGAAAAACCTACCAGTAATTCCAGTTCCCAACAGTTGTGTACTGTAGACCTGCCCACGGTGGGTTGGCCTTTACAAAGTATAATTATGTTTAATTGGGTAATAAACATTGATTGAATCGTTGTA
>TU1741315
TGGGGTGGGGACACCTTGTCGGTGCATCATTGCCTTTCCCTCATTAGCACTTTCCTGAGCCTTCAAATGAGTGTAAATGAAATAAGAGACGAGGAAAGGTAGCAGCCATTATAGAAAAGACAAGCTTCACGTGCAGCTGCTGTCAACACCAGAACTCTGCCATAGCTAATACATGCCCCCCAGGCTTGTATTCGATAGCAGAAAGATAGCAGAGAGACGGATCTATTGAATAGAGATGCTGTCATTTTGggatcccgagtggcacagcggtctaaggctcagTGCAagtggcgtcactacagtccctggttcaattccaagctgtatcacatccggcgtgattgggagtcccatagggcggtgcacatttggcctagcgtcatccgggtttggccggggtaggccgtcattgtaaataagaatttgttcttaactggcttgcctagttaaataaaggttacatttcattttttaTAGTTTGGGGTCTGCTAGACAACAGCAAGGAacatctcctttctctcctctcagcctTTCCAGATGCTAATCATGAGTACACAGTAACTGTAATCTGCATAAGGAGGTGTTgatgtgggatcttatatagccTAAACCTTGTACAGTTAGACGTGTTTAGTTTAGGTCTGGTTCCTAATTTTCCAACTCCCTGTGGTCCTTTTCGCTGACTAAAGTAAACAGATAACAGTTGAGAAAAAGtgtcatgtggtgtgtgtgtgtctatgtgtgtgtgtgtatgttgggaAAGTGGCTGTCATTAACATTTTAATTACCACAAATACCAGCGATAGCACAACAATTGACGCGTGAGTGGGAGAGGTGGAGACTCTTGTGACTTTTAAGCGCACCTAGGTGCAATCGCGCTACAGGCAGCGACACAGAGAGAGGCCCAAATGGAGACAGCAACGTTGCAGTACAGTCCCATGGAGCACCAAACAGAAGCACTGAAGTTGCTACAGAATGTGCGCTCTCACCAAACAGCGATCAGTAGGCCCAGTAAACTTGGACTAGAAAAACAAGTGACAACCATCCACGACTCGTCAGCAGCGGCCCGCACAATAGCAGAAAAGGCGCGTGAAAGTGTCATTACGCAGCTAATCGATATTCTAACCCAAATACTCACAGTCGAGGAAGAAATCAGTCATAGTTTGTTTCAGGATCTGAGGACATTTCTGCACCCTAAAGTGAGTGTTTTATCCCTTATATGAAATTCTAATTTTTTGGTGAGTGATGGTTTGCATAATTTGACAAAAAGTTTGATATCTTTCTATTTGGTTGATAGGCTAGAGATTAGAATAATGATTATGAATGAGAAAACAATATTGTATGAATATCAAAATATTTTGTATATGTTAAAAAGAAACTGCATTTGTTATGACTGACTCATGTTGGCTAGACGTAAAAGCTTCCCAGTCGAAACAGTTCACGGATATATTATGACGACGTTTTtgtgacgttttttttttttttttcgtgaAGGGTATAATTGCAGACCGCAATTAGGGGCGTTTTCTGATATAGGTGTTTCTTGATATCAAGTTACACCAATTGATGCTAGCCATTGGTCTGTGGCCGTTTATTTTATGTCGGGACAACAGTTGTTGACAATTGTAGCTAAGCCTAACCCTTTTCTTAACTTTAACCGTTAATAATCCTAACCTGACACGTACGTTATCCTAAcctttatgttttgtattgtaaAGCCATTCAAAATGTCAAATATAGAAAGAACAAACAAAGAGTGTACAAACAACATTCCTTTTCTGCTCTTACCAGAGTTTCTAaacggtcgtcactagttaccacagccacaaagtgattgcttcctacaagagcacaaaacgtgtacatttctagacatatTTAAAAGCAAATCTAGAGCCGATTCTGTAATAATAATGGTATGGTAATAATAATGCATttcattttgtaaagtggtttcttgcatcaaacaacaagaacattttcagtcacctccttgtctaaaggacaagtggataaacaggatAATGTCAAAcccagattttttttcttcttcaaaggTCTCATGGAATGTTGGCCTACATTGAACACAACACATTGGctactactgtaggctgaatgatagaacagccaTTTCCAGGTTCAAATGTTATGGAATGCATTTTCTGagttgtttttgatggtaggccacacTGGTAGGCCtatattatgatcaaatagccacagtagccaaCTTGAACACTGTctgaaactgtaacttaaagcgggtacagcctcagtgttcacagtaaactcgAGCTGGAAgttgaaatttgctcagtgaaaTAAACATTTTGAGGAAACATTGCTTCTCTTACTTTATTAGTTAACAAATGTTCATATGGATTAGTCCACATTAGTTATCCTAAACTGCGATGTAAACAAATCATCTGTGGCAAGAGCCCATCAGTCTAGTCTGactagttttcatgcacattaCTTCAATAGAGAagtactgcaccaaacatctagATGTAAATagacattaaaaaaaatgtcaatatgttacagatttcttgatttaCCTTAATTAATTGAAGCTATTTTGAGGAACTGTACTGGCTCTGTTGTTGCTATGATGAGACGAGCGACAAACAATAGTAATATTGCcgctttttcatttttttcaaaCAAAGGTCTTCGGGAGTATGCGAGCAGAGATGTTCGCCTagccgagttctgctaggagcaaaccgAACCTATGTATGCGGACGCCTCTACCAAATAGGTTTTATAACTAACACAAGATAGACcagagcctgtcgtttccaatgggagcaaataAACTATAGTGGGCAAAACAAACAAGGCGGTGaacagagccaagcacgagctagtgagAACCTATTGGCTCAATctagcatttatttgcatatttccgttagggaatgTCTACTCTGTGAAATGTGCGTGTGCAAGAACTCAAGTCTCccttgcactcctaaacaacaCCATTTTTAAAACTTTGACAAagtgtaaagtctacaaaactcaATCCATTCTGTTTGTTATagattttagttttggaaatTGTATGAGATTTGGTTTCAtcagccaaaatccatctcgctccatctactcccactgccggccactgggtttcctctcatcaccatatttggtactGAGTGGAATTGTTCTATCTGTGCCTCTACTCTCTCCACCTAGGAAAGCATAGAGCTGAGGAACATCTGTGTGCGCATGGCAGTGAGGGACTCTGACTGTCAGAAGGACCGGGACCTTAGAGATCTGCAGGACTGTTTAAAAGCCATGGTGGACAGTCTGGTGTCTTCTCTCATCAACGTGAACCATCCCGTGGCCGTTCAGACATCACGCACGCTTGAAGAGATATATCTGAGCTTCCCTGAAATCTGAATAGCTAATATCTCACTTTACCTAATCTCAGGGTTGATAGCCTATTGTTTACTTGAATGTacattttaaataatttattttatttcaaattATTGGAGGTGCAACTATGTAGGCCTCCTTTGTAAAAAGGAATGTCAGAAGAAATGATACTGGGACAAACATGTGTGTTATGCAAAGTGTTTTATACAAATCCTCCTTAAAGGCCTGAAGTTTCTGTCAGTTTGAAAAACCTACCAGTAATTCCAGTTCCCAACAGTTGTGTACTGTAGACCTGCCCACGGTGGGTTGGCCTTTACAAAGTATAATTATGTTTAATTGGGTAATAAACATTGATTGAATCGTTGTATGATGTTGTTACTTCACATTTCCGTGGATATATGTTTAGATCTGACCTTTAAGACAA

Function

NR:

description
LOW QUALITY PROTEIN: leukemia-associated protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036952032.1 False 1375 mRNA 0.43 2 16427974 16431353
TU1741315 True 3814 lncRNA 0.40 1 16427597 16431410

Neighbor

gene id symbol gene type direction distance location
gucy1b2 LOC106575503 coding upstream 436 16422245 ~ 16427538 (+)
LOC110495670 tgds coding upstream 60092 16352833 ~ 16367882 (+)
LOC110495668 LOC106575499 coding upstream 82213 16338325 ~ 16345761 (+)
LOC110497062 LOC106575548 coding upstream 95752 16288881 ~ 16332222 (+)
LOC110495667 LOC106575562 coding upstream 150056 16272236 ~ 16277918 (+)
LOC110495674 LOC106575504 coding downstream 22765 16454118 ~ 16468453 (+)
LOC110495678 LOC106575507 coding downstream 39751 16471104 ~ 16474100 (+)
LOC110495675 LOC106575507 coding downstream 45119 16476472 ~ 16486304 (+)
LOC110495676 LOC106575553 coding downstream 55500 16486853 ~ 16496136 (+)
LOC110495683 LOC106575518 coding downstream 182296 16613649 ~ 16685491 (+)
G1520964 NA non-coding upstream 15399 16412220 ~ 16412575 (+)
G1520876 NA non-coding upstream 196905 16230577 ~ 16231069 (+)
G1520736 NA non-coding upstream 235802 16185985 ~ 16192172 (+)
G1520733 NA non-coding upstream 236501 16185213 ~ 16191473 (+)
G1520968 NA non-coding downstream 368 16431721 ~ 16431929 (+)
G1520973 NA non-coding downstream 7606 16438959 ~ 16439393 (+)
G1521008 NA non-coding downstream 84753 16516106 ~ 16516354 (+)
G1521026 NA non-coding downstream 108475 16539828 ~ 16540341 (+)
G1521053 NA non-coding downstream 152312 16583665 ~ 16583951 (+)
G1520748 NA other upstream 489156 15938230 ~ 15938818 (+)
G1520742 NA other upstream 505075 15919157 ~ 15922899 (+)
G1520649 NA other upstream 611969 15756493 ~ 15816005 (+)
LOC110495644 LOC106575583 other upstream 628093 15796262 ~ 15801788 (+)
LOC110495440 LOC106575601 other upstream 1211730 15207355 ~ 15251952 (+)
LOC110527374 LOC106592210 other downstream 1192463 17623786 ~ 17631132 (+)
G1522415 LOC106575491 other downstream 1334866 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 1408316 17839669 ~ 17844014 (+)
G1522438 NA other downstream 1424788 17856141 ~ 17860614 (+)
G1520721 NA non-coding upstream 223995 16157267 ~ 16203602 (+)

Expression


Co-expression Network