LOC118936563 (LOC106591654)


Basic Information

Item Value
gene id LOC118936563
gene name LOC106591654
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 17705378 ~ 17715036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951414.1
ACGTGGTCagaacccaacccaaccccaccCTACTGGACTAGGTCTACCCACAATAaaaaagaggaaagaggagacgaaaagaggaagagagatgggaggatCAGAATATTTTTGCCTAAAATAAATAGCCTTTACATTTAAAATAGAATGTTCTAAAAGGGGAATATATTCGAAGAAACACTCAGAAtcaaacagacacacatgctTTCACTCATGCACGCGCATACCCAAACACACACCAAAATCCATCGCTTTGTTTTGCCCAGCTTTATGGTGGTGGTAGCCTACCATTAGGAATTTGGAGCGGTGAGAGGAGGggcgtttgtgtatgtgtgaaggAACAGTCGGTCTCCTCCCCTCGTCTCCCCCCGCCCTCTCGCGCCCCCCATGCCTTTGTGTGCGCGAGGCTCTCTGTGAGCAGCGGTTCTTCAAGTGAGATATCGGTTCGTTTCTGAGCGCTGTTTGAGTTTGTGGGCTGTTCAAACATAGCCTGGCTGACTGGGACTGGGGTGAACCGGTAGAAGGCACGTGAAACCTCGGAGTTTATTCACACACGCGCGATCAGAAGGAAAATAACGGAGAAATATCGAATATCGGACTTTTCCCTTTCGTCTTACCCATCTATCATTCTCCCTTTATCATTCTCTCGTCTTCTCTATCCGTGGAGAATCTGACCAACCTAAACAAcctgatgtgtgtgtatgtgtgttttgggGGCGTAAAACAACTGGCAGCGCGTGAAGATGGATTAACGTTTGAACGGAAAACTGGAGCAGCACGCAAGACCTCGGCGAGGGGGGAGGGCAAGACGGGCCTCTGCTAACACACACAACCCGCGGGACAGAGACTCTGATTGGACCAACACCAGGATGATGTCGTCACCAAAAGCCAAGACCAAGAAGAAACCTCCCAAAGACAGCATGACACTTCTACCATGCTTCTACTTCATAGAGcTCCCCATcgtcctctcctcccttgtctctctctacttcatggAGTTGACAGACCTGTTGTCCCCGGCGACCCCTGGGTTCCATTGCTATGACCGGGACCTGTCGTTGCCCTACCTGGAGACAGGAGATGAACTGATCCCTCTGCTGATGTTACTGAGCCTGGCCTTCGCAGGACCGGCTGCCTCGatcATGCTGGGTGAAGGGCTGGTGTATTGTTACCAGTCCAGAGTCAAACAGAGTAAAGCTGATGGGTGTAACTTCAACTCCTTCCTACGGAGGACTGTTCGCTTTGTTGgTGTTCATGTGTTTGGTCTCCTGGCAACAGCCCTAATGACAGACATCATCCAGTTGGCTACTGGTTATCCCACCCCTTTCTTCCTGACTGTCTGTCAGCCCAATTACACGCTGCCTGGGATATCATGTGACCAGAACAATTACATCACACAGGACATCTGCTCTGGGAAAGATATGTATGCCATCCTGTcagccaggAAAACATTTCCGTCCCAGCATGCAACGCTCTCTGGCTTTGCTGCTGTCTACATCTCTatgtattTGAACAGTGTGATCAGCAGTAGTACTAAGCTGGTGAAGCCGGTGCTGGTGTTTGGATACTGTCTGGCCGCGGGTATAGCCGGACTGACTCAGATCACACAACACCGCTGCCATCCCAGAGATGTCTATGTTGGCTACGCCATAGGAGCTGGcataggagtctacctgTCTCTGTATGCAGTAGGTAACTTCAGGTCATCCGAGGAGGACTGCCTCCCCCAGCCTGTTCGGAGGGCTGCGTCCCCCCCCCAGCAGCAGAGGGAGGTGGTGGTGAGGGGAAGAGCCCAGAGAGGTCATGCTTCTCAGCACGGCTCTCTGTACCGCAGCAAGACACCCAGACCATCAGACAGCAGGGAGGAACTGGGCACTGGGCGCTGCAAGGTTCGTAGGGAGAAGGCCAGCGTAGCATCTCTGAAGAGGGCCAGTGCTGACGTGGAGCTCCTGGCACCCCGCGGCCCCATGGGAAAGGAAACCATGGTAACATTCAGCAATACCTTACCCCGCGTCGCCAATGGCAGCAGCAGCACCTCGCCCCCCGGAGACGACCCCTCCAACCAGCGTCACATGACCTTCCACCTGTCCTTCGACCCCCGCAGGTCACAACCAAGGCTGCGACCACCACTGGTGCAGGAGTGGAGACAGCAGCGCTCTACGGAGAGACGGagcgaggaggagggagagacggacacATCTggcggaggagagggaggagcagggggagggggCGAGGCAGGGGAGACAGGGGTGATGAATCCTCCCTCCCTTTATCCGACGGTACAGTCGGCCAATCGAGCCATTGCCACGGCTACCCCAGCGCCAGCCCCACTGGTGCATATCCCTAAGGAGGGGATTAGACACCCCCCTACTGTCTCCCCTCTAcctccttctgtctcctctctacctcctacggtctcccctctacctccttctgtctcctctctacctccccctgtctcccctaaGAGCGCGGTGACGCGTGCCAAGTTGATGTCACTCAACCAGGGAGGGGAACGAGTCAGGGAGGGGCCTATCCCTGTGACAACTCCGCGTGTGCCCCACCAGCTGCCCAATCAGCCGCCCAATCAGCCGCGAGTGGCGCAGGTCATTGCCATGTCCAAGCAGCACGGACCAATCAGCTCCTCTGCCAAGGGCTCTGACTCTGCCTCTTCTTGTGGAGGAGGGTCTTCAACAGGAAGCTCTGAGTCTCCGTACTACCGGGTCCCCTCTGACCATGACAGCCACACCGGGAGTGTTGTCACGATAGACGCTCACGCCCCTCATCACCCTGTGGTCAGGGTGTCTAGCAGTGTCAGTACCGGGAGTAACGGGACCCTGGGGGCCAGAGTAACAGCTGCCGGTAACGGGACCCCCTGGGAGCGGAGGAACACCACCAGCGGGAGCGTCGGTGAGCAGGGCCAGAGGGGGGCGCTGCAGCGCCAGGAGAAAGTCTCTGCACCGGAATATCGGGAATACCGAACACTTCCTGTGAAATCAGACTCtatctgctcctcctctcccagcCAGACCGATTCCTccaccctgcctccccctcctcaccccatctcctctccactccctcccttctcttcctccaccctacCTCCGCCTCCTcagcccacctcctccccc

Function

NR:

description
PREDICTED: lipid phosphate phosphatase-related protein type 3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951414.1 True 3137 mRNA 0.56 11 17705378 17715036

Neighbor

gene id symbol gene type direction distance location
LOC110527382 LOC106575451 coding upstream 64588 17638633 ~ 17640790 (+)
LOC110527377 LOC100136320 coding upstream 68794 17631679 ~ 17636584 (+)
LOC110527374 LOC106592210 coding upstream 74246 17623786 ~ 17631132 (+)
LOC110527370 LOC106575456 coding upstream 84943 17611532 ~ 17620435 (+)
mrps9 LOC106574616 coding upstream 94503 17592445 ~ 17610875 (+)
LOC110519433 NA coding downstream 1 17715037 ~ 17716919 (+)
LOC110528768 LOC106591671 coding downstream 116414 17831450 ~ 17839017 (+)
LOC110527394 LOC106591034 coding downstream 327697 18042733 ~ 18053825 (+)
LOC110528909 LOC106595470 coding downstream 342666 18057702 ~ 18075184 (+)
LOC110495693 LOC105019803 coding downstream 361164 18076200 ~ 18093990 (+)
G1522348 LOC106575485 non-coding upstream 20846 17675210 ~ 17684532 (+)
G1522385 NA non-coding upstream 33438 17670456 ~ 17671940 (+)
G1522372 NA non-coding upstream 60639 17642830 ~ 17644739 (+)
G1522368 NA non-coding upstream 67205 17637971 ~ 17638173 (+)
G1522396 NA non-coding downstream 2661 17717697 ~ 17718046 (+)
G1522401 LOC106591655 non-coding downstream 9079 17724115 ~ 17733070 (+)
G1522410 LOC100194703 non-coding downstream 32409 17747445 ~ 17747757 (+)
G1522412 NA non-coding downstream 36671 17751707 ~ 17753430 (+)
LOC110495674 LOC106575504 other upstream 1236955 16454118 ~ 16468453 (+)
G1520748 NA other upstream 1766560 15938230 ~ 15938818 (+)
G1520742 NA other upstream 1782479 15919157 ~ 15922899 (+)
LOC110495644 LOC106575583 other upstream 1905497 15796262 ~ 15801788 (+)
G1522415 LOC106575491 other downstream 51183 17766219 ~ 17766694 (+)
G1522437 LOC106575479 other downstream 124633 17839669 ~ 17844014 (+)
G1522438 NA other downstream 141105 17856141 ~ 17860614 (+)
G1522684 NA other downstream 664051 18379087 ~ 18380258 (+)
LOC110495728 LOC106574584 other downstream 879298 18594324 ~ 18595682 (+)

Expression


Co-expression Network