zgc:101785 (LOC106588494)


Basic Information

Item Value
gene id zgc:101785
gene name LOC106588494
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 36974996 ~ 36989677 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021571827.2
AAGGAGGCGGGTGCAGTAAGGGCAGTTTTGTTGTTGTACGGGCAGTTTAGCTACTTGCTCACCTTTCGTTCTGACTACTGGTTGTCTTTGTCACAGGTGAAATTCAGACATGGACATGGAGTACTTGCCATCCTACGAGATGTCCTGGGGTACCTTGGGTACTATAAGGCCCTTCCTTAACTTCCATGCTAAGAGAGATGCTCTGAACATTCAGGCTGCTCTGGAACAGAAAGATGCACCTACTCTGATAAAAATCCTGACCAACCGCAGCAATGCTCAAAGACAAATCATCGCTCAGATCTTCAAAACCATCACCGAGAAGGAGCTGTCCTCTGGGCTGAAGAAGGCCCTGTCTGGGGAGTTGGAGAATTTGCTGTTGGCCTTGCTGATGACCCCACTGCAGTTTGAGGCCTATCGTCTGAGACAATCCATGGAGGGCATTGGCACAGATGAGGAGGGTTTGCTAGAGATTCTGTGCACCAGGTCACCCAAGGCGCTTGCCAACATCACCTCCACCTACAAGGAGCAGTATGATAAGGATCTAGAGACGGACCTGAAGGGTGAGACCAGTGGGGACTTTGCCAAACTCGTCCTGGCCTTACTCAAGAAGAAAAAGGTAGTAGGAATGGTGCAAAGAGACACAGAGGCTCTCGCTGAAGCTATCAATCAGGCGAAGGCAGATCCTGGACCATGGATCACCATTCTGACTACCAGAGACTCTGAACATCTtaacaaagTGTTCGTCAATTTGGAGAGTGAGAAGCAAGAGACAGTGGATAAAGCAATAGAGAAAGCATTCAGTGGAGATGTGAGACTTGGGCTGAAAACATtggTGCGTTGCATACAGAGCCCAAACCTCTACCTGGCTCAGAGACTGGAGACCATGAAGGCAGCCATAGTCCAGGGGGTGATGGTGTCCCACAGTGAGGAGGATCTGCTGTGTGTGAGAGTGGCTTATCTCAGACAGACGGGCACCTCACTCTATACAGCCCTACAGAAACAATTCAAAGGTGATCACCTACAAGCACTGCTGGCTATCTGTCGATCTGAAGACTAAAGGAATGAGTTTTGTGTACAATTTCACATTAGCTCAGCCTACACATTACTATTCACATTTGAGTATTTACAGtagacagatgtaggatcttaatttgagccagtttgctacagcaggaaaataatcctgcagcaactggatatgtgaattgttatgtggattataattaataccAAATATTGTAGCGGTTGATACATTTTCGTGAggaaaaatcaagtctgaaatcaagtgaaaattacaaacttcaggaGTCTTTTTAAACATTACATTCCCTGcaattgcaggaaagttctccttcAACACGGGGAtcgaattaagatcctacatctgtattgctcTATGTGTCATTCCTGCACGGTAATGCAAGAAAATCAAACTTTGTCCTATTGCTAATGCTCATAATGCCTAATGTCACAGTAAAGTCACACCTTCAAGTGTACTTTCATTTGAAGTGTACTTCCATACATACTTTTATGAAAATAAAAATTGGATTACAATGAA
>XM_036952651.1
AAGGAGGCGGGTGCAGTAAGGGCAGTTTTGTTGTTGTACGGGCAGTTTAGCTACTTGCTCACCTTTCGTTCTGACTACTGGTTGTCTTTGTCACAGGTGAAATTCAGACATGGACATGGAGTACTTGCCATCCTACGAGATGTCCTGGGGTACCTTGGGTACTATAAGGCCCTTCCTTAACTTCCATGCTAAGAGAGATGCTCTGAACATTCAGGCTGCTCTGGAACAGAAAGATGCACCTACTCTGATAAAAATCCTGACCAACCGCAGCAATGCTCAAAGACAAATCATCGCTCAGATCTTCAAAACCATCACCGAGAAGGAGCTGTCCTCTGGGCTGAAGAAGGCCCTGTCTGGGGAGTTGGAGAATTTGCTGTTGGCCTTGCTGATGACCCCACTGCAGTTTGAGGCCTATCGTCTGAGACAATCCATGGAGGGCATTGGCACAGATGAGGAGGGTTTGCTAGAGATTCTGTGCACCAGGTCACCCAAGGCGCTTGCCAACATCACCTCCACCTACAAGGAGCAGTATGATAAGGATCTAGAGACGGACCTGAAGGGTGAGACCAGTGGGGACTTTGCCAAACTCGTCCTGGCCTTACTCAAGAAGAAAAAGGTAGTAGGAATGGTGCAAAGAGACACAGAGGCTCTCGCTGAAGCTATCAATCAGGCGAAGGCAGATCCTGGACCATGGATCACCATTCTGACTACCAGAGACTCTGAACATCTtaacaaagTGCGTTGCATACAGAGCCCAAACCTCTACCTGGCTCAGAGACTGGAGACCATGAAGGCAGCCATAGTCCAGGGGGTGATGGTGTCCCACAGTGAGGAGGATCTGCTGTGTGTGAGAGTGGCTTATCTCAGACAGACGGGCACCTCACTCTATACAGCCCTACAGAAACAATTCAAAGGTGATCACCTACAAGCACTGCTGGCTATCTGTCGATCTGAAGACTAAAGGAATGAGTTTTGTGTACAATTTCACATTAGCTCAGCCTACACATTACTATTCACATTTGAGTATTTACAGtagacagatgtaggatcttaatttgagccagtttgctacagcaggaaaataatcctgcagcaactggatatgtgaattgttatgtggattataattaataccAAATATTGTAGCGGTTGATACATTTTCGTGAggaaaaatcaagtctgaaatcaagtgaaaattacaaacttcaggaGTCTTTTTAAACATTACATTCCCTGcaattgcaggaaagttctccttcAACACGGGGAtcgaattaagatcctacatctgtattgctcTATGTGTCATTCCTGCACGGTAATGCAAGAAAATCAAACTTTGTCCTATTGCTAATGCTCATAATGCCTAATGTCACAGTAAAGTCACACCTTCAAGTGTACTTTCATTTGAAGTGTACTTCCATACATACTTTTATGAAAATAAAAATTGGATTACAATGAA
>XM_036952650.1
AAGGAGGCGGGTGCAGTAAGGGCAGTTTTGTTGTTGTACGGGCAGTTTAGCTACTTGCTCACCTTTCGTTCTGACTACTGGTTGTCTTTGTCACAGGTGAAATTCAGACATGGACATGGAGTACTTGCCATCCTACGAGATGTCCTGGGGTACCTTGGGTACTATAAGGCCCTTCCTTAACTTCCATGCTAAGAGAGATGCTCTGAACATTCAGGCTGCTCTGGAACAGAAAGATGCACCTACTCTGATAAAAATCCTGACCAACCGCAGCAATGCTCAAAGACAAATCATCGCTCAGATCTTCAAAACCATCACCGAGAAGGAGCTGTCCTCTGGGCTGAAGAAGGCCCTGTCTGGGGAGTTGGAGAATTTGCTGTTGGCCTTGCTGATGACCCCACTGCAGTTTGAGGCCTATCGTCTGAGACAATCCATGGAGGGCATTGGCACAGATGAGGAGGGTTTGCTAGAGATTCTGTGCACCAGGTCACCCAAGGCGCTTGCCAACATCACCTCCACCTACAAGGAGCAGTATGATAAGGATCTAGAGACGGACCTGAAGGGTGAGACCAGTGGGGACTTTGCCAAACTCGTCCTGGCCTTACTCAAGAAGAAAAAGGTAGTAGGAATGGTGCAAAGAGACACAGAGGCTCTCGCTGAAGCTATCAATCAGGCGAAGGCAGATCCTGGACCATGGATCACCATTCTGACTACCAGAGACTCTGAACATCTtaacaaagTGCGTTGCATACAGAGCCCAAACCTCTACCTGGCTCAGAGACTGGAGACCATGAAGGCAGCCATAGTCCAGGGGGTGATGGTGTCCCACAGTGAGGAGGATCTGCTGTGTGTGAGAGTGGCTTATCTCAGACAGACGGGCACCTCACTCTATACAGCCCTACAGGGTGCCTTTCCTTCACCGGGCTGGCCATTTGGGAAATTTTGGGCAGAAATAGAGTAtgcccacttctccaggcaccactacaccactgtgtGTACCCACCAGATGTAATGCACATTTAGACTcccacatgtacacacacttatCTGCATGCCAGTAGCACACCTGTTTGAGGAATGAAAAACAAAATCTATGTATTTATTTCCTGTAACAAATACAGTAGAAAGGCATGTCAATGAAAGTACCTATTTACAGTATCTCAACCAAGCAGCACAGTCTTTCAATAAAAataatgactttttttttttttt
>XM_036952648.1
TGGacacacacagtaaaacccaCATATCTCATTTCACTCTGCTCCAGGAACAGAGTACAGACAATATCCTAGGCACTAGGTGGACACAGTAAGGAAGAGAGTGGAACTTTCCAAGTTCCTCACCAAACCAGGTGAAATTCAGACATGGACATGGAGTACTTGCCATCCTACGAGATGTCCTGGGGTACCTTGGGTACTATAAGGCCCTTCCTTAACTTCCATGCTAAGAGAGATGCTCTGAACATTCAGGCTGCTCTGGAACAGAAAGATGCACCTACTCTGATAAAAATCCTGACCAACCGCAGCAATGCTCAAAGACAAATCATCGCTCAGATCTTCAAAACCATCACCGAGAAGGAGCTGTCCTCTGGGCTGAAGAAGGCCCTGTCTGGGGAGTTGGAGAATTTGCTGTTGGCCTTGCTGATGACCCCACTGCAGTTTGAGGCCTATCGTCTGAGACAATCCATGGAGGGCATTGGCACAGATGAGGAGGGTTTGCTAGAGATTCTGTGCACCAGGTCACCCAAGGCGCTTGCCAACATCACCTCCACCTACAAGGAGCAGTATGATAAGGATCTAGAGACGGACCTGAAGGGTGAGACCAGTGGGGACTTTGCCAAACTCGTCCTGGCCTTACTCAAGAAGAAAAAGGTAGTAGGAATGGTGCAAAGAGACACAGAGGCTCTCGCTGAAGCTATCAATCAGGCGAAGGCAGATCCTGGACCATGGATCACCATTCTGACTACCAGAGACTCTGAACATCTtaacaaagTGTTCGTCAATTTGGAGAGTGAGAAGCAAGAGACAGTGGATAAAGCAATAGAGAAAGCATTCAGTGGAGATGTGAGACTTGGGCTGAAAACATtggTGCGTTGCATACAGAGCCCAAACCTCTACCTGGCTCAGAGACTGGAGACCATGAAGGCAGCCATAGTCCAGGGGGTGATGGTGTCCCACAGTGAGGAGGATCTGCTGTGTGTGAGAGTGGCTTATCTCAGACAGACGGGCACCTCACTCTATACAGCCCTACAGGGTGCCTTTCCTTCACCGGGCTGGCCATTTGGGAAATTTTGGGCAGAAATAGAGTAtgcccacttctccaggcaccactacaccactgtgtGTACCCACCAGATGTAATGCACATTTAGACTcccacatgtacacacacttatCTGCATGCCAGTAGCACACCTGTTTGAGGAATGAAAAACAAAATCTATGTATTTATTTCCTGTAACAAATACAGTAGAAAGGCATGTCAATGAAAGTACCTATTTACAGTATCTCAACCAAGCAGCACAGTCTTTCAATAAAAataatgacttttttt
>XM_036952647.1
AAGGAGGCGGGTGCAGTAAGGGCAGTTTTGTTGTTGTACGGGCAGTTTAGCTACTTGCTCACCTTTCGTTCTGACTACTGGTTGTCTTTGTCACAGGTGAAATTCAGACATGGACATGGAGTACTTGCCATCCTACGAGATGTCCTGGGGTACCTTGGGTACTATAAGGCCCTTCCTTAACTTCCATGCTAAGAGAGATGCTCTGAACATTCAGGCTGCTCTGGAACAGAAAGATGCACCTACTCTGATAAAAATCCTGACCAACCGCAGCAATGCTCAAAGACAAATCATCGCTCAGATCTTCAAAACCATCACCGAGAAGGAGCTGTCCTCTGGGCTGAAGAAGGCCCTGTCTGGGGAGTTGGAGAATTTGCTGTTGGCCTTGCTGATGACCCCACTGCAGTTTGAGGCCTATCGTCTGAGACAATCCATGGAGGGCATTGGCACAGATGAGGAGGGTTTGCTAGAGATTCTGTGCACCAGGTCACCCAAGGCGCTTGCCAACATCACCTCCACCTACAAGGAGCAGTATGATAAGGATCTAGAGACGGACCTGAAGGGTGAGACCAGTGGGGACTTTGCCAAACTCGTCCTGGCCTTACTCAAGAAGAAAAAGGTAGTAGGAATGGTGCAAAGAGACACAGAGGCTCTCGCTGAAGCTATCAATCAGGCGAAGGCAGATCCTGGACCATGGATCACCATTCTGACTACCAGAGACTCTGAACATCTtaacaaagTGTTCGTCAATTTGGAGAGTGAGAAGCAAGAGACAGTGGATAAAGCAATAGAGAAAGCATTCAGTGGAGATGTGAGACTTGGGCTGAAAACATtggTGCGTTGCATACAGAGCCCAAACCTCTACCTGGCTCAGAGACTGGAGACCATGAAGGCAGCCATAGTCCAGGGGGTGATGGTGTCCCACAGTGAGGAGGATCTGCTGTGTGTGAGAGTGGCTTATCTCAGACAGACGGGCACCTCACTCTATACAGCCCTACAGGGTGCCTTTCCTTCACCGGGCTGGCCATTTGGGAAATTTTGGGCAGAAATAGAGTAtgcccacttctccaggcaccactacaccactgtgtGTACCCACCAGATGTAATGCACATTTAGACTcccacatgtacacacacttatCTGCATGCCAGTAGCACACCTGTTTGAGGAATGAAAAACAAAATCTATGTATTTATTTCCTGTAACAAATACAGTAGAAAGGCATGTCAATGAAAGTACCTATTTACAGTATCTCAACCAAGCAGCACAGTCTTTCAATAAAAataatgactttttt

Function

NR:

description
annexin A2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021571827.2 False 1558 mRNA 0.45 13 36974996 36987526
XM_036952651.1 False 1462 mRNA 0.45 12 36974996 36987526
XM_036952650.1 False 1209 mRNA 0.48 12 36975579 36987526
XM_036952648.1 False 1333 mRNA 0.47 13 36975586 36989677
XM_036952647.1 True 1297 mRNA 0.48 13 36975587 36987526

Neighbor

gene id symbol gene type direction distance location
zgc:114119 LOC106588497 coding downstream 35348 36931300 ~ 36939648 (-)
LOC110496120 LOC106588498 coding downstream 139936 36823864 ~ 36835060 (-)
LOC110496119 ppp1r36 coding downstream 161451 36800516 ~ 36813545 (-)
sdc2 LOC106570046 coding downstream 181599 36759185 ~ 36793397 (-)
LOC110496117 LOC106612724 coding downstream 227673 36744378 ~ 36747323 (-)
LOC110496124 LOC106588493 coding upstream 564 36990241 ~ 37056749 (-)
prdm1b LOC106588492 coding upstream 87350 37077027 ~ 37090104 (-)
LOC110496131 borea coding upstream 749164 37738841 ~ 37744121 (-)
LOC110496132 LOC106588485 coding upstream 765340 37755017 ~ 37757210 (-)
LOC110496134 LOC106511154 coding upstream 769111 37758788 ~ 37796944 (-)
G1544592 NA non-coding downstream 6352 36968223 ~ 36968644 (-)
G1544405 NA non-coding downstream 8995 36965677 ~ 36966001 (-)
G1544403 NA non-coding downstream 9764 36964973 ~ 36965232 (-)
G1544378 NA non-coding downstream 25163 36949586 ~ 36949833 (-)
G1544375 NA non-coding downstream 27041 36947726 ~ 36947955 (-)
G1544600 NA non-coding upstream 28453 37018130 ~ 37022860 (-)
G1544758 NA non-coding upstream 273765 37263442 ~ 37263860 (-)
G1544764 NA non-coding upstream 277473 37267150 ~ 37267554 (-)
G1544796 NA non-coding upstream 307546 37297223 ~ 37297532 (-)
G1543346 LOC106588513 other downstream 962310 36010987 ~ 36012686 (-)
G1543128 LOC106588245 other downstream 1470839 35452618 ~ 35504157 (-)
LOC118941140 NA other downstream 1478014 35492995 ~ 35499681 (-)
LOC110496085 NA other downstream 1625334 35346895 ~ 35351655 (-)
LOC110496081 LOC106588241 other downstream 1794968 35151351 ~ 35203984 (-)
G1544806 NA other upstream 311831 37301508 ~ 37302174 (-)
ppt1 LOC106588481 other upstream 932478 37922153 ~ 37930745 (-)
LOC110496154 LOC106588291 other upstream 1157913 38121576 ~ 38152320 (-)
G1546053 NA other upstream 1175573 38165250 ~ 38214049 (-)
LOC110496167 LOC106588455 other upstream 1569972 38557052 ~ 38563365 (-)

Expression


Co-expression Network