G1513934


Basic Information

Item Value
gene id G1513934
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 7651041 ~ 7651297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732430
CTGACATACTGAACATGTACCTGGTATTCATGCAGGAATCCATTtacccagtacactactttatgttACTGTCAAAGAACAAGAAGCTTCATTGTTTTCCTGAACTCGTTGTCTTGTGGACCTGGGATAGTCCCGATTCTGCATTAAAAACACCctgtttcctatatagtgcactgctttagaccagggttggcaacctattccctttatagggccccggtcaaaagtagtgcactaaataggaaacatggtgccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732430 True 257 lncRNA 0.43 1 7651041 7651297

Neighbor

gene id symbol gene type direction distance location
LOC110495404 LOC106574906 coding upstream 33729 7600419 ~ 7617337 (+)
LOC110496984 LOC106595027 coding upstream 53653 7585227 ~ 7597388 (+)
LOC110495403 LOC106595176 coding upstream 69740 7534691 ~ 7581314 (+)
LOC110495411 LOC106574896 coding upstream 118961 7514568 ~ 7532080 (+)
LOC110495412 vegfd coding upstream 202624 7431822 ~ 7448743 (+)
LOC110518829 LOC106592802 coding downstream 57377 7708674 ~ 7711981 (+)
LOC118941082 LOC106594224 coding downstream 64898 7716195 ~ 7733810 (+)
LOC110511354 LOC106575893 coding downstream 91498 7742795 ~ 7753724 (+)
LOC110511355 LOC106592813 coding downstream 106739 7758036 ~ 7801058 (+)
LOC110516423 LOC106574939 coding downstream 150326 7801623 ~ 7888704 (+)
G1513931 NA non-coding upstream 11578 7638640 ~ 7639463 (+)
G1513930 NA non-coding upstream 15121 7635682 ~ 7635920 (+)
G1513921 NA non-coding upstream 43562 7606485 ~ 7607479 (+)
G1513914 NA non-coding upstream 47598 7584366 ~ 7603443 (+)
G1513937 NA non-coding downstream 3135 7654432 ~ 7656272 (+)
G1513938 NA non-coding downstream 6004 7657301 ~ 7658334 (+)
G1513956 NA non-coding downstream 31042 7682339 ~ 7683907 (+)
G1513958 NA non-coding downstream 35526 7686823 ~ 7688616 (+)
G1513922 NA other upstream 29100 7620296 ~ 7621941 (+)
G1513874 NA other upstream 224070 7426583 ~ 7426971 (+)
LOC110513752 LOC106575969 other upstream 553881 7032578 ~ 7102239 (+)
G1513452 NA other upstream 624231 7026208 ~ 7026810 (+)
LOC110516612 LOC106574917 other upstream 940993 6705632 ~ 6710286 (+)
G1514045 LOC106574979 other downstream 362563 8013860 ~ 8015030 (+)
G1514180 NA other downstream 695930 8347227 ~ 8412799 (+)
LOC110528849 LOC105022557 other downstream 847253 8498352 ~ 8506254 (+)
G1514274 NA other downstream 925196 8576493 ~ 8576825 (+)

Expression


Co-expression Network