G1514240


Basic Information

Item Value
gene id G1514240
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8473241 ~ 8473790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732867
GATTTTAATTTCacatctgttcccaagtattcccacataATAGGGAGATACGTGATCGTAtagaaatgtaagcaaggtttaaaatgattgttttagtcaaacatctGTTTGGGCTTATTGCAGTCAATCTGCACTCTACAAATCATTAGTAATTATGTTCCCACTCCCTAAAAAATGGTCCTGAGGCTGAATCTAGGTGATGATCCCTGCACTACCAAGTAGATGAACTGTTATGAATACAGGCCTACTTGAAGCGTGTCTGTGACTTGCATGTCTGAATGAGGTTGGATGCCTAAATGTAACTATTCATGACATTATAAATGCACAGACACCTCACACTTCTCCCTTCCTTTTCTATTGACTCAAGCTACTGCCTTTTTCAACTTCCTCATACGCCTTATCCgcctgttaaatagccatcactagatgacctccacccagtactctaccctgatCTTAGTCACTGtctctagccggctaccacccagttactctaCCCTGATCTTAGTCACTGtctctagccggctaccacccagttactcaatcCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732867 True 550 lncRNA 0.42 1 8473241 8473790

Neighbor

gene id symbol gene type direction distance location
LOC118941085 LOC106575914 coding upstream 569 8469399 ~ 8472672 (+)
LOC118941084 NA coding upstream 510161 7961999 ~ 7965688 (+)
spag17 spag17 coding upstream 526431 7891187 ~ 7946810 (+)
LOC110516423 LOC106574939 coding upstream 584537 7801623 ~ 7888704 (+)
LOC110511355 LOC106592813 coding upstream 676029 7758036 ~ 7801058 (+)
LOC110528836 chsta coding downstream 1262 8475052 ~ 8479361 (+)
LOC110528849 LOC105022557 coding downstream 24562 8498352 ~ 8506254 (+)
LOC118936321 LOC106575888 coding downstream 32349 8506139 ~ 8511196 (+)
LOC110495394 LOC106574832 coding downstream 150461 8623967 ~ 8676626 (+)
LOC110495395 LOC106574852 coding downstream 203707 8677497 ~ 8682383 (+)
G1514227 NA non-coding upstream 15183 8457734 ~ 8458058 (+)
G1514176 NA non-coding upstream 57309 8336156 ~ 8415932 (+)
G1514208 NA non-coding upstream 71073 8401202 ~ 8402168 (+)
G1514205 NA non-coding upstream 75780 8397196 ~ 8397461 (+)
G1514192 NA non-coding upstream 94848 8370447 ~ 8378393 (+)
G1514241 NA non-coding downstream 598 8474388 ~ 8474727 (+)
G1514244 NA non-coding downstream 8940 8482730 ~ 8484157 (+)
G1514248 NA non-coding downstream 19735 8493525 ~ 8493895 (+)
G1514238 NA non-coding downstream 20732 8494522 ~ 8494818 (+)
G1514250 NA non-coding downstream 28720 8502510 ~ 8503077 (+)
G1514180 NA other upstream 60442 8347227 ~ 8412799 (+)
G1514045 LOC106574979 other upstream 458211 8013860 ~ 8015030 (+)
G1513922 NA other upstream 851300 7620296 ~ 7621941 (+)
G1513874 NA other upstream 1046270 7426583 ~ 7426971 (+)
G1514274 NA other downstream 102703 8576493 ~ 8576825 (+)
G1515005 cbs other downstream 526608 9000398 ~ 9003126 (+)

Expression


Co-expression Network