G1514238


Basic Information

Item Value
gene id G1514238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8494522 ~ 8494818 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732865
CTCGACGCTCGTGTCGGTGCTCCTGGGCAGGTGGGCTCCTCCCCCTCTCGCTGCGTCCTCTCTCACGCCCCCGAGAGTGGTTTCGTCCTCCGGGGCTAGTCCTCCtctgaggagaggaggtgtcCCGGGAGGCTGCAGGGGAGCGGGAGGAACACCTCTGGCCAGGAGGTGAGGAGGCGGCTGGGGGCTCGCGGTTGTAGGTGGGGGATGCCGAGCGGCGCCGGCGAGGGGAAGAAGAGTGTCTCTGGGCTGAGGAGCCagagtgggaggagggggagTGGTGGCGGGACGGGGTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732865 True 297 lncRNA 0.70 1 8494522 8494818

Neighbor

gene id symbol gene type direction distance location
LOC110528836 chsta coding upstream 15161 8475052 ~ 8479361 (+)
LOC118941085 LOC106575914 coding upstream 21850 8469399 ~ 8472672 (+)
LOC118941084 NA coding upstream 531442 7961999 ~ 7965688 (+)
spag17 spag17 coding upstream 547712 7891187 ~ 7946810 (+)
LOC110516423 LOC106574939 coding upstream 605818 7801623 ~ 7888704 (+)
LOC110528849 LOC105022557 coding downstream 3534 8498352 ~ 8506254 (+)
LOC118936321 LOC106575888 coding downstream 11321 8506139 ~ 8511196 (+)
LOC110495394 LOC106574832 coding downstream 129433 8623967 ~ 8676626 (+)
LOC110495395 LOC106574852 coding downstream 182679 8677497 ~ 8682383 (+)
LOC110495396 rnd3 coding downstream 223656 8718474 ~ 8744053 (+)
G1514248 NA non-coding upstream 627 8493525 ~ 8493895 (+)
G1514244 NA non-coding upstream 10365 8482730 ~ 8484157 (+)
G1514241 NA non-coding upstream 19795 8474388 ~ 8474727 (+)
G1514240 NA non-coding upstream 20732 8473241 ~ 8473790 (+)
G1514227 NA non-coding upstream 36464 8457734 ~ 8458058 (+)
G1514250 NA non-coding downstream 7692 8502510 ~ 8503077 (+)
G1514253 NA non-coding downstream 25697 8520515 ~ 8520754 (+)
G1514254 NA non-coding downstream 26589 8521407 ~ 8521695 (+)
G1514255 NA non-coding downstream 28173 8522991 ~ 8525487 (+)
G1514180 NA other upstream 81723 8347227 ~ 8412799 (+)
G1514045 LOC106574979 other upstream 479492 8013860 ~ 8015030 (+)
LOC110511355 LOC106592813 other upstream 693464 7758036 ~ 7801058 (+)
G1513922 NA other upstream 872581 7620296 ~ 7621941 (+)
G1513874 NA other upstream 1067551 7426583 ~ 7426971 (+)
G1514274 NA other downstream 81675 8576493 ~ 8576825 (+)
G1515005 cbs other downstream 505580 9000398 ~ 9003126 (+)

Expression


Co-expression Network