G1514278


Basic Information

Item Value
gene id G1514278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8583952 ~ 8584236 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732923
gtttaattccattcctttactagatgtgtgtgtattgggaatatgttgtgtaattggtagttattacttgttagatattactgcactgttggagctagaagcacaagcatttctctacaccagcaataacatctgataaacacgtgtatgtgaccaataacatttgatttgacatttagTCAATTCCACTCCACACAGACAGTACCCATATACAGGAAGAACAATTTAGTGTTCTAATACACCTGTCGCAGTGATGTCATTGATTTCATTTGGATTTGATTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732923 True 285 lncRNA 0.35 1 8583952 8584236

Neighbor

gene id symbol gene type direction distance location
LOC118936321 LOC106575888 coding upstream 72756 8506139 ~ 8511196 (+)
LOC110528849 LOC105022557 coding upstream 77698 8498352 ~ 8506254 (+)
LOC110528836 chsta coding upstream 104591 8475052 ~ 8479361 (+)
LOC118941085 LOC106575914 coding upstream 111280 8469399 ~ 8472672 (+)
LOC118941084 NA coding upstream 620872 7961999 ~ 7965688 (+)
LOC110495394 LOC106574832 coding downstream 40015 8623967 ~ 8676626 (+)
LOC110495395 LOC106574852 coding downstream 93261 8677497 ~ 8682383 (+)
LOC110495396 rnd3 coding downstream 134238 8718474 ~ 8744053 (+)
LOC110495389 mmadhc coding downstream 239293 8823529 ~ 8835425 (+)
LOC118941058 NA coding downstream 263754 8847990 ~ 8852444 (+)
G1514272 NA non-coding upstream 8931 8574791 ~ 8575021 (+)
G1514255 NA non-coding upstream 58465 8522991 ~ 8525487 (+)
G1514254 NA non-coding upstream 62257 8521407 ~ 8521695 (+)
G1514253 NA non-coding upstream 63198 8520515 ~ 8520754 (+)
G1514284 zranb3 non-coding downstream 19764 8604000 ~ 8604228 (+)
G1514285 NA non-coding downstream 21372 8605608 ~ 8605809 (+)
G1514286 NA non-coding downstream 26660 8610896 ~ 8611254 (+)
G1514287 NA non-coding downstream 32401 8616637 ~ 8616844 (+)
G1514288 NA non-coding downstream 32908 8617144 ~ 8617353 (+)
G1514274 NA other upstream 7127 8576493 ~ 8576825 (+)
G1514180 NA other upstream 171153 8347227 ~ 8412799 (+)
G1514045 LOC106574979 other upstream 568922 8013860 ~ 8015030 (+)
LOC110511355 LOC106592813 other upstream 782894 7758036 ~ 7801058 (+)
G1515005 cbs other downstream 416162 9000398 ~ 9003126 (+)
G1515776 NA other downstream 1390292 9974528 ~ 9975306 (+)
G1515853 NA other downstream 1585866 10170102 ~ 10171956 (+)

Expression


Co-expression Network