G1514293


Basic Information

Item Value
gene id G1514293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8622463 ~ 8622775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1732943
CATGTCAACCTCTGTCCACGGAGGGTGTCCTAAAAGATTAACCAAACTTGGCAGTCAATGTGTGTGTTGCTCTGATCCGCCTCAGCCTCTGGTCCCACTACAACAACTCCAACACAGCACCTGGCTCTCCTGATCGCTAACAGCTTGCATCACTCGTCTCCATGGAGAAACCGTACACAGAACCCTACAAAGCCCAGATAGTGTTTACGGTCACATTGATGTCTCCAACATATTGACTGGATGACTCATCCTCACAGTACATCACTTCTACTGTCCCTGTATTGATCTACTGCTCAGGCTGACTACTCTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1732943 True 313 lncRNA 0.49 1 8622463 8622775

Neighbor

gene id symbol gene type direction distance location
LOC118936321 LOC106575888 coding upstream 111267 8506139 ~ 8511196 (+)
LOC110528849 LOC105022557 coding upstream 116209 8498352 ~ 8506254 (+)
LOC110528836 chsta coding upstream 143102 8475052 ~ 8479361 (+)
LOC118941085 LOC106575914 coding upstream 149791 8469399 ~ 8472672 (+)
LOC118941084 NA coding upstream 659383 7961999 ~ 7965688 (+)
LOC110495394 LOC106574832 coding downstream 1476 8623967 ~ 8676626 (+)
LOC110495395 LOC106574852 coding downstream 54722 8677497 ~ 8682383 (+)
LOC110495396 rnd3 coding downstream 95699 8718474 ~ 8744053 (+)
LOC110495389 mmadhc coding downstream 200754 8823529 ~ 8835425 (+)
LOC118941058 NA coding downstream 225215 8847990 ~ 8852444 (+)
G1514292 NA non-coding upstream 335 8621898 ~ 8622128 (+)
G1514291 NA non-coding upstream 2258 8619974 ~ 8620205 (+)
G1514289 NA non-coding upstream 4799 8617443 ~ 8617664 (+)
G1514288 NA non-coding upstream 5110 8617144 ~ 8617353 (+)
G1514287 NA non-coding upstream 5619 8616637 ~ 8616844 (+)
G1514294 NA non-coding downstream 249 8623024 ~ 8623583 (+)
G1514312 NA non-coding downstream 100431 8723206 ~ 8724789 (+)
G1514316 NA non-coding downstream 104990 8727765 ~ 8729055 (+)
G1514867 NA non-coding downstream 122830 8745605 ~ 8745807 (+)
G1514274 NA other upstream 45638 8576493 ~ 8576825 (+)
G1514180 NA other upstream 209664 8347227 ~ 8412799 (+)
G1514045 LOC106574979 other upstream 607433 8013860 ~ 8015030 (+)
LOC110511355 LOC106592813 other upstream 821405 7758036 ~ 7801058 (+)
G1515005 cbs other downstream 377623 9000398 ~ 9003126 (+)
G1515776 NA other downstream 1351753 9974528 ~ 9975306 (+)
G1515853 NA other downstream 1547327 10170102 ~ 10171956 (+)

Expression


Co-expression Network