Gene
RNA
| Item | Value |
|---|---|
| gene id | G1514911 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 8842854 ~ 8844626 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1733744 | False | 645 | lncRNA | 0.34 | 2 | 8842854 | 8844626 |
| TU1733746 | True | 304 | lncRNA | 0.34 | 2 | 8842854 | 8843586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495389 | mmadhc | coding | upstream | 7429 | 8823529 ~ 8835425 (+) |
| LOC110495396 | rnd3 | coding | upstream | 98801 | 8718474 ~ 8744053 (+) |
| LOC110495395 | LOC106574852 | coding | upstream | 160471 | 8677497 ~ 8682383 (+) |
| LOC110495394 | LOC106574832 | coding | upstream | 166228 | 8623967 ~ 8676626 (+) |
| LOC118936321 | LOC106575888 | coding | upstream | 331658 | 8506139 ~ 8511196 (+) |
| LOC118941058 | NA | coding | downstream | 3364 | 8847990 ~ 8852444 (+) |
| LOC110495382 | orc4 | coding | downstream | 84307 | 8928933 ~ 8933881 (+) |
| hsf2bp | hsf2bp | coding | downstream | 90569 | 8935195 ~ 8947637 (+) |
| LOC110496912 | NA | coding | downstream | 104235 | 8948861 ~ 8950192 (+) |
| LOC110496974 | LOC106574764 | coding | downstream | 105750 | 8950376 ~ 8968786 (+) |
| G1514910 | NA | non-coding | upstream | 106 | 8842449 ~ 8842748 (+) |
| G1514899 | NA | non-coding | upstream | 22674 | 8792941 ~ 8820180 (+) |
| G1514886 | NA | non-coding | upstream | 66737 | 8775819 ~ 8776117 (+) |
| G1514881 | NA | non-coding | upstream | 80281 | 8762305 ~ 8762573 (+) |
| G1514869 | NA | non-coding | upstream | 95689 | 8746227 ~ 8747165 (+) |
| G1514920 | NA | non-coding | downstream | 18702 | 8863328 ~ 8863596 (+) |
| G1514947 | NA | non-coding | downstream | 24215 | 8868841 ~ 8869119 (+) |
| G1514949 | NA | non-coding | downstream | 25516 | 8870142 ~ 8870829 (+) |
| G1514951 | NA | non-coding | downstream | 27556 | 8872182 ~ 8873111 (+) |
| G1514955 | NA | non-coding | downstream | 32457 | 8877083 ~ 8877916 (+) |
| G1514274 | NA | other | upstream | 266029 | 8576493 ~ 8576825 (+) |
| LOC110528849 | LOC105022557 | other | upstream | 338518 | 8498352 ~ 8506254 (+) |
| G1514180 | NA | other | upstream | 430055 | 8347227 ~ 8412799 (+) |
| G1515005 | cbs | other | downstream | 155772 | 9000398 ~ 9003126 (+) |
| G1515776 | NA | other | downstream | 1129902 | 9974528 ~ 9975306 (+) |
| G1515853 | NA | other | downstream | 1325476 | 10170102 ~ 10171956 (+) |
| G1516136 | NA | other | downstream | 1474684 | 10310107 ~ 10327138 (+) |
| G1516637 | NA | other | downstream | 2172139 | 11016765 ~ 11017089 (+) |
