G1514955


Basic Information

Item Value
gene id G1514955
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 8877083 ~ 8877916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1733798
ccagccagcgagtcagccagccagccagccagtcagtcagtcagtcagtcaatcacagAGCCTTGACGTACCACAGTCTCCTCCAGTCCCTTGAGGTCCTGTCTGGCCTGCTCTCTCTGCTCGTTGAAGATGACCAGCTTCTGGAGCTTCATGTCCTTCTCCTGTTCCTCCACCTTCAGCTTCTCATGGTCAGACATCAGCCTCCTCTGCTCCAGCATCAGGCCCTGgttcagactgggagagacacggaggaggagagggggagagcagaggtAGAGGAAAGGTAGGGGAGAGGTAGGGGATaggtaggggagaggaagaggagaggtagaggagaggtagaggagaggtaggggagaggtagaggagaggtaggggagaggaagaggagaggtaggggagaggtagaggagaggttggggagagggtgaaaaggaggagagaaaag

Function

NR:

description
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase setd3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1733798 True 448 lncRNA 0.57 2 8877083 8877916

Neighbor

gene id symbol gene type direction distance location
LOC118941058 NA coding upstream 24639 8847990 ~ 8852444 (+)
LOC110495389 mmadhc coding upstream 41658 8823529 ~ 8835425 (+)
LOC110495396 rnd3 coding upstream 133030 8718474 ~ 8744053 (+)
LOC110495395 LOC106574852 coding upstream 194700 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 coding upstream 200457 8623967 ~ 8676626 (+)
LOC110495382 orc4 coding downstream 51017 8928933 ~ 8933881 (+)
hsf2bp hsf2bp coding downstream 57279 8935195 ~ 8947637 (+)
LOC110496912 NA coding downstream 70945 8948861 ~ 8950192 (+)
LOC110496974 LOC106574764 coding downstream 72460 8950376 ~ 8968786 (+)
LOC110527296 LOC106575803 coding downstream 145200 9023116 ~ 9030662 (+)
G1514951 NA non-coding upstream 3972 8872182 ~ 8873111 (+)
G1514949 NA non-coding upstream 6254 8870142 ~ 8870829 (+)
G1514947 NA non-coding upstream 7964 8868841 ~ 8869119 (+)
G1514920 NA non-coding upstream 13487 8863328 ~ 8863596 (+)
G1514911 NA non-coding upstream 32457 8842854 ~ 8844626 (+)
G1514967 NA non-coding downstream 30006 8907922 ~ 8908881 (+)
G1514968 NA non-coding downstream 32236 8910152 ~ 8912132 (+)
G1514971 mbd5 non-coding downstream 40094 8918010 ~ 8918251 (+)
G1514996 NA non-coding downstream 107263 8985179 ~ 8987654 (+)
G1514998 NA non-coding downstream 111737 8989653 ~ 8990784 (+)
G1514274 NA other upstream 300258 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 372747 8498352 ~ 8506254 (+)
G1514180 NA other upstream 464284 8347227 ~ 8412799 (+)
G1515005 cbs other downstream 122482 9000398 ~ 9003126 (+)
G1515776 NA other downstream 1096612 9974528 ~ 9975306 (+)
G1515853 NA other downstream 1292186 10170102 ~ 10171956 (+)
G1516136 NA other downstream 1441394 10310107 ~ 10327138 (+)
G1516637 NA other downstream 2138849 11016765 ~ 11017089 (+)

Expression


Co-expression Network