Gene
RNA
| Item | Value |
|---|---|
| gene id | G1515699 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 9806954 ~ 9807741 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1734852 | True | 410 | lncRNA | 0.39 | 3 | 9806954 | 9807741 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527259 | LOC106575807 | coding | upstream | 41724 | 9742104 ~ 9765236 (+) |
| LOC110495570 | LOC106573853 | coding | upstream | 255959 | 9501508 ~ 9550995 (+) |
| LOC110495547 | ptprn | coding | upstream | 507311 | 9256574 ~ 9299643 (+) |
| LOC110497024 | dnpep | coding | upstream | 551549 | 9246827 ~ 9255405 (+) |
| LOC100653484 | LOC106573841 | coding | upstream | 646947 | 9134562 ~ 9160007 (+) |
| LOC110527263 | LOC106598167 | coding | downstream | 35824 | 9843565 ~ 9845412 (+) |
| LOC110527266 | LOC106595105 | coding | downstream | 43712 | 9851453 ~ 9854072 (+) |
| LOC110497036 | LOC106575870 | coding | downstream | 49110 | 9856851 ~ 9859254 (+) |
| LOC110495578 | LOC106575871 | coding | downstream | 55641 | 9863382 ~ 9864362 (+) |
| LOC110495581 | LOC106575873 | coding | downstream | 66969 | 9874710 ~ 9875894 (+) |
| G1515697 | NA | non-coding | upstream | 319 | 9805706 ~ 9806635 (+) |
| G1515694 | NA | non-coding | upstream | 9113 | 9797318 ~ 9797841 (+) |
| G1515693 | NA | non-coding | upstream | 10171 | 9796519 ~ 9796783 (+) |
| G1515674 | NA | non-coding | upstream | 37794 | 9767650 ~ 9769160 (+) |
| G1515722 | NA | non-coding | downstream | 35441 | 9843182 ~ 9843388 (+) |
| G1515750 | NA | non-coding | downstream | 108584 | 9916325 ~ 9916610 (+) |
| G1515751 | NA | non-coding | downstream | 112152 | 9919893 ~ 9920098 (+) |
| G1515754 | NA | non-coding | downstream | 114671 | 9922412 ~ 9922765 (+) |
| G1515771 | NA | non-coding | downstream | 145760 | 9953501 ~ 9959326 (+) |
| G1515005 | cbs | other | upstream | 803828 | 9000398 ~ 9003126 (+) |
| LOC110495395 | LOC106574852 | other | upstream | 1126744 | 8677497 ~ 8682383 (+) |
| LOC110495394 | LOC106574832 | other | upstream | 1130443 | 8623967 ~ 8676626 (+) |
| G1514274 | NA | other | upstream | 1230129 | 8576493 ~ 8576825 (+) |
| LOC110528849 | LOC105022557 | other | upstream | 1302618 | 8498352 ~ 8506254 (+) |
| G1515776 | NA | other | downstream | 166787 | 9974528 ~ 9975306 (+) |
| G1515853 | NA | other | downstream | 362361 | 10170102 ~ 10171956 (+) |
| G1516136 | NA | other | downstream | 511569 | 10310107 ~ 10327138 (+) |
| G1516637 | NA | other | downstream | 1209024 | 11016765 ~ 11017089 (+) |
| LOC118941092 | LOC106575823 | other | downstream | 1278344 | 10978682 ~ 11092554 (+) |
