G1515722


Basic Information

Item Value
gene id G1515722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 9843182 ~ 9843388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1734883
ccttaacaacaCCTAACTCtcactttaaccctaaccttaaattaagaccaacaagcacatttttgttttcatgaatttgtaTGATATAGCCAAGTCTGACTTTGGCTGTTTTTATCTAGTAGAAAAGCTGTTTGGCTCTCAGTCGACTTGCGAATAGGAAGAACTTTGCAGCGGAATCAAAAAAACATTGCTATGCTGGTGGGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1734883 True 207 lncRNA 0.38 1 9843182 9843388

Neighbor

gene id symbol gene type direction distance location
LOC110527259 LOC106575807 coding upstream 77952 9742104 ~ 9765236 (+)
LOC110495570 LOC106573853 coding upstream 292187 9501508 ~ 9550995 (+)
LOC110495547 ptprn coding upstream 543539 9256574 ~ 9299643 (+)
LOC110497024 dnpep coding upstream 587777 9246827 ~ 9255405 (+)
LOC100653484 LOC106573841 coding upstream 683175 9134562 ~ 9160007 (+)
LOC110527263 LOC106598167 coding downstream 177 9843565 ~ 9845412 (+)
LOC110527266 LOC106595105 coding downstream 8065 9851453 ~ 9854072 (+)
LOC110497036 LOC106575870 coding downstream 13463 9856851 ~ 9859254 (+)
LOC110495578 LOC106575871 coding downstream 19994 9863382 ~ 9864362 (+)
LOC110495581 LOC106575873 coding downstream 31322 9874710 ~ 9875894 (+)
G1515699 NA non-coding upstream 35441 9806954 ~ 9807741 (+)
G1515697 NA non-coding upstream 36547 9805706 ~ 9806635 (+)
G1515694 NA non-coding upstream 45341 9797318 ~ 9797841 (+)
G1515693 NA non-coding upstream 46399 9796519 ~ 9796783 (+)
G1515674 NA non-coding upstream 74022 9767650 ~ 9769160 (+)
G1515750 NA non-coding downstream 72937 9916325 ~ 9916610 (+)
G1515751 NA non-coding downstream 76505 9919893 ~ 9920098 (+)
G1515754 NA non-coding downstream 79024 9922412 ~ 9922765 (+)
G1515771 NA non-coding downstream 110113 9953501 ~ 9959326 (+)
G1515773 NA non-coding downstream 116250 9959638 ~ 9959841 (+)
G1515005 cbs other upstream 840056 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1162972 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1166671 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1266357 8576493 ~ 8576825 (+)
LOC110528849 LOC105022557 other upstream 1338846 8498352 ~ 8506254 (+)
G1515776 NA other downstream 131140 9974528 ~ 9975306 (+)
G1515853 NA other downstream 326714 10170102 ~ 10171956 (+)
G1516136 NA other downstream 475922 10310107 ~ 10327138 (+)
G1516637 NA other downstream 1173377 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 1242697 10978682 ~ 11092554 (+)

Expression


Co-expression Network