Gene
RNA
| Item | Value |
|---|---|
| gene id | G1515771 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 9953501 ~ 9959326 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1734941 | True | 213 | lncRNA | 0.41 | 2 | 9953501 | 9959326 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110495584 | LOC106574807 | coding | upstream | 60266 | 9887375 ~ 9893235 (+) |
| LOC110495581 | LOC106575873 | coding | upstream | 77607 | 9874710 ~ 9875894 (+) |
| LOC110495578 | LOC106575871 | coding | upstream | 89139 | 9863382 ~ 9864362 (+) |
| LOC110497036 | LOC106575870 | coding | upstream | 94247 | 9856851 ~ 9859254 (+) |
| LOC110527266 | LOC106595105 | coding | upstream | 99429 | 9851453 ~ 9854072 (+) |
| LOC118941061 | NA | coding | downstream | 159334 | 10118660 ~ 10121810 (+) |
| LOC110495585 | LOC106574888 | coding | downstream | 172204 | 10131530 ~ 10134128 (+) |
| LOC118941088 | LOC106575836 | coding | downstream | 187623 | 10146949 ~ 10149129 (+) |
| LOC118941089 | LOC106574813 | coding | downstream | 403244 | 10362570 ~ 10368578 (+) |
| LOC110510737 | LOC106575810 | coding | downstream | 430302 | 10389628 ~ 10856330 (+) |
| G1515754 | NA | non-coding | upstream | 30736 | 9922412 ~ 9922765 (+) |
| G1515751 | NA | non-coding | upstream | 33403 | 9919893 ~ 9920098 (+) |
| G1515750 | NA | non-coding | upstream | 36891 | 9916325 ~ 9916610 (+) |
| G1515722 | NA | non-coding | upstream | 110113 | 9843182 ~ 9843388 (+) |
| G1515699 | NA | non-coding | upstream | 145760 | 9806954 ~ 9807741 (+) |
| G1515773 | NA | non-coding | downstream | 312 | 9959638 ~ 9959841 (+) |
| G1515794 | NA | non-coding | downstream | 79807 | 10039133 ~ 10047234 (+) |
| G1515796 | NA | non-coding | downstream | 85207 | 10044533 ~ 10045023 (+) |
| G1515819 | NA | non-coding | downstream | 135078 | 10094404 ~ 10094738 (+) |
| G1515820 | NA | non-coding | downstream | 141024 | 10100350 ~ 10100724 (+) |
| G1515005 | cbs | other | upstream | 950375 | 9000398 ~ 9003126 (+) |
| LOC110495395 | LOC106574852 | other | upstream | 1273291 | 8677497 ~ 8682383 (+) |
| LOC110495394 | LOC106574832 | other | upstream | 1276990 | 8623967 ~ 8676626 (+) |
| G1514274 | NA | other | upstream | 1376676 | 8576493 ~ 8576825 (+) |
| LOC110528849 | LOC105022557 | other | upstream | 1449165 | 8498352 ~ 8506254 (+) |
| G1515776 | NA | other | downstream | 15202 | 9974528 ~ 9975306 (+) |
| G1515853 | NA | other | downstream | 210776 | 10170102 ~ 10171956 (+) |
| G1516136 | NA | other | downstream | 359984 | 10310107 ~ 10327138 (+) |
| G1516637 | NA | other | downstream | 1057439 | 11016765 ~ 11017089 (+) |
| LOC118941092 | LOC106575823 | other | downstream | 1126759 | 10978682 ~ 11092554 (+) |
