G1515819


Basic Information

Item Value
gene id G1515819
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10094404 ~ 10094738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1734990
gttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgaatgcccaatttttccgtttttgatttgttaaaaaagtctgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaaaatacagttttatatctttatg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1734990 True 335 lncRNA 0.36 1 10094404 10094738

Neighbor

gene id symbol gene type direction distance location
LOC110495584 LOC106574807 coding upstream 201169 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 218510 9874710 ~ 9875894 (+)
LOC110495578 LOC106575871 coding upstream 230042 9863382 ~ 9864362 (+)
LOC110497036 LOC106575870 coding upstream 235150 9856851 ~ 9859254 (+)
LOC110527266 LOC106595105 coding upstream 240332 9851453 ~ 9854072 (+)
LOC118941061 NA coding downstream 23922 10118660 ~ 10121810 (+)
LOC110495585 LOC106574888 coding downstream 36792 10131530 ~ 10134128 (+)
LOC118941088 LOC106575836 coding downstream 52211 10146949 ~ 10149129 (+)
LOC118941089 LOC106574813 coding downstream 267832 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 294890 10389628 ~ 10856330 (+)
G1515794 NA non-coding upstream 47170 10039133 ~ 10047234 (+)
G1515796 NA non-coding upstream 49381 10044533 ~ 10045023 (+)
G1515773 NA non-coding upstream 134563 9959638 ~ 9959841 (+)
G1515771 NA non-coding upstream 135078 9953501 ~ 9959326 (+)
G1515754 NA non-coding upstream 171639 9922412 ~ 9922765 (+)
G1515820 NA non-coding downstream 5612 10100350 ~ 10100724 (+)
G1515829 NA non-coding downstream 18871 10113609 ~ 10113876 (+)
G1515834 NA non-coding downstream 33521 10128259 ~ 10128512 (+)
G1515837 NA non-coding downstream 39868 10134606 ~ 10137597 (+)
G1515841 NA non-coding downstream 44237 10138975 ~ 10139576 (+)
G1515776 NA other upstream 119098 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1091278 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1414194 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1417893 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1517579 8576493 ~ 8576825 (+)
G1515853 NA other downstream 75364 10170102 ~ 10171956 (+)
G1516136 NA other downstream 224572 10310107 ~ 10327138 (+)
G1516637 NA other downstream 922027 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 991347 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1538329 11633067 ~ 11634979 (+)

Expression


Co-expression Network