G1515846


Basic Information

Item Value
gene id G1515846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10156466 ~ 10157258 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735025
TGATCTGCTGGGCCTCAGACTCAGAAACAGCTGTGTCACCACCCTGCTGTGTATCGGCTCCCGCTTCCATGGTCATTTAGTTGGCTGGAATGGCGGGTGGAGAACTCTGGAGAGCCTGTGAATGTGCGTTTTTACACAAAATGTAAAATATTGGTATGGGGGTGGATTTAattcagggctctccaaccctgtttctggagagatAAAGTTGTGTAGGTTCACgccaatcctgttcctggagataccATCTTGTAGGgtttcgctccaaccccagttgtaccTAACCTGATTCAGCTCATCAACCAGCTAactattagaatcaggtgcattGGATTACAGTTGGAgctaaaacctacaggatggtagctctccaggaagaagGTTGGTGTGAaaccctacaggatggtagctccccaggaacagggttggagagcactGATTAAGTGATGTTATACACTGACTGTGATGTTTCAGGTCGTGGCTTTTGTGCCTCTGTCTATCCATACCAGACCAGGTTTGTTTAAGTGATTGTAGGCTACACCAGACATGCAGTATTACGTGTGACTATCTGAAAGTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735025 True 578 lncRNA 0.47 2 10156466 10157258

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 7337 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 22338 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 34656 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 263231 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 280572 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 205312 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 232370 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 699111 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 787145 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 803486 10960744 ~ 10967479 (+)
G1515841 NA non-coding upstream 16890 10138975 ~ 10139576 (+)
G1515837 NA non-coding upstream 18869 10134606 ~ 10137597 (+)
G1515834 NA non-coding upstream 27954 10128259 ~ 10128512 (+)
G1515829 NA non-coding upstream 42590 10113609 ~ 10113876 (+)
G1515820 NA non-coding upstream 55742 10100350 ~ 10100724 (+)
G1515854 NA non-coding downstream 10833 10168091 ~ 10168751 (+)
G1515855 NA non-coding downstream 19693 10176951 ~ 10177404 (+)
G1515866 LOC107575789 non-coding downstream 53041 10210299 ~ 10210703 (+)
G1515871 NA non-coding downstream 66325 10223583 ~ 10223794 (+)
G1515874 NA non-coding downstream 72182 10229440 ~ 10229823 (+)
G1515776 NA other upstream 181160 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1153340 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1476256 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1479955 8623967 ~ 8676626 (+)
G1514274 NA other upstream 1579641 8576493 ~ 8576825 (+)
G1515853 NA other downstream 12844 10170102 ~ 10171956 (+)
G1516136 NA other downstream 162052 10310107 ~ 10327138 (+)
G1516637 NA other downstream 859507 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 928827 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1475809 11633067 ~ 11634979 (+)

Expression


Co-expression Network