G1515866 (LOC107575789)


Basic Information

Item Value
gene id G1515866
gene name LOC107575789
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10210299 ~ 10210703 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735056
cgggcgctgcaggatttcagcccctcacggcgtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattgacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgcaactccacgaggtgagatcttgcatggagccccaggccaagGGAGAtggacagttcttttgtgtttcttccatttgcgaataatcgcaccaactgttgtcaccttctcaccaagctgcttggcgatggtcttgtagcccattccagccttgtctaggtctacaatcttgtccctgacatccttggagagctctttggtcttggccatggtggagagtttggaatctgattgattgattgattgcttctgtggacaggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735056 True 405 lncRNA 0.50 1 10210299 10210703

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 61170 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 76171 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 88489 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 317064 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 334405 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 151867 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 178925 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 645666 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 733700 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 750041 10960744 ~ 10967479 (+)
G1515855 NA non-coding upstream 32895 10176951 ~ 10177404 (+)
G1515854 NA non-coding upstream 41548 10168091 ~ 10168751 (+)
G1515846 NA non-coding upstream 53041 10156466 ~ 10157258 (+)
G1515841 NA non-coding upstream 70723 10138975 ~ 10139576 (+)
G1515837 NA non-coding upstream 72702 10134606 ~ 10137597 (+)
G1515871 NA non-coding downstream 12880 10223583 ~ 10223794 (+)
G1515874 NA non-coding downstream 18737 10229440 ~ 10229823 (+)
G1516074 NA non-coding downstream 21874 10232577 ~ 10232787 (+)
G1516079 NA non-coding downstream 27818 10238521 ~ 10239459 (+)
G1516094 NA non-coding downstream 41853 10252556 ~ 10252892 (+)
G1515853 NA other upstream 38343 10170102 ~ 10171956 (+)
G1515776 NA other upstream 234993 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1207173 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1530089 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1533788 8623967 ~ 8676626 (+)
G1516136 NA other downstream 108607 10310107 ~ 10327138 (+)
G1516637 NA other downstream 806062 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 875382 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1422364 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1432086 11642789 ~ 11643758 (+)

Expression


Co-expression Network