G1515871


Basic Information

Item Value
gene id G1515871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10223583 ~ 10223794 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735061
CTTCATTACTTTGAAATGTAGAGATCTGCATCATATCAGATGACGATAGTGATTTATCATACAAGTTACTGCACGTCTGACAATATTTCAGGGTTTTCTCACTACGAATTGAGAAATGaaggaaaaatgtatggaaaaaTACTAGAATTGAATTGAATGAATCCCTCCATAAGTGAACGGCTGAATTGAAGACTGCTCCTATACCAGTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735061 True 212 lncRNA 0.35 1 10223583 10223794

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 74454 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 89455 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 101773 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 330348 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 347689 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 138776 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 165834 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 632575 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 720609 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 736950 10960744 ~ 10967479 (+)
G1515866 LOC107575789 non-coding upstream 12880 10210299 ~ 10210703 (+)
G1515855 NA non-coding upstream 46179 10176951 ~ 10177404 (+)
G1515854 NA non-coding upstream 54832 10168091 ~ 10168751 (+)
G1515846 NA non-coding upstream 66325 10156466 ~ 10157258 (+)
G1515841 NA non-coding upstream 84007 10138975 ~ 10139576 (+)
G1515874 NA non-coding downstream 5646 10229440 ~ 10229823 (+)
G1516074 NA non-coding downstream 8783 10232577 ~ 10232787 (+)
G1516079 NA non-coding downstream 14727 10238521 ~ 10239459 (+)
G1516094 NA non-coding downstream 28762 10252556 ~ 10252892 (+)
G1516108 NA non-coding downstream 39029 10262823 ~ 10263074 (+)
G1515853 NA other upstream 51627 10170102 ~ 10171956 (+)
G1515776 NA other upstream 248277 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1220457 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1543373 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1547072 8623967 ~ 8676626 (+)
G1516136 NA other downstream 95516 10310107 ~ 10327138 (+)
G1516637 NA other downstream 792971 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 862291 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1409273 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1418995 11642789 ~ 11643758 (+)

Expression


Co-expression Network