G1516094


Basic Information

Item Value
gene id G1516094
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10252556 ~ 10252892 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735333
gtagattgggtgggctatttacagatggactatgtacagctgcagagatcagttagctgctcagatagctgatgtttaaagttaatgagggaaatgtaagtctccagcttcagcgatttttgcaatttgttccagtcactggcagcagagaactggaaggaaaggcggccaaaggaggtgttggctttgtggatgaccagtgagatatacccgctggagcgtgtgctacgggtgggtgttgttaacgtgaccagtgagctgagataaggcagagctttagctagcatagacttgtagatgacctggagccagtgggtctggcgatgaatatgtagcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735333 True 337 lncRNA 0.48 1 10252556 10252892

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 103427 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 118428 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 130746 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 359321 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 376662 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 109678 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 136736 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 603477 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 691511 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 707852 10960744 ~ 10967479 (+)
G1516079 NA non-coding upstream 13097 10238521 ~ 10239459 (+)
G1516074 NA non-coding upstream 19769 10232577 ~ 10232787 (+)
G1515874 NA non-coding upstream 22733 10229440 ~ 10229823 (+)
G1515871 NA non-coding upstream 28762 10223583 ~ 10223794 (+)
G1515866 LOC107575789 non-coding upstream 41853 10210299 ~ 10210703 (+)
G1516108 NA non-coding downstream 9931 10262823 ~ 10263074 (+)
G1516126 NA non-coding downstream 35466 10288358 ~ 10288578 (+)
G1516128 NA non-coding downstream 43915 10296807 ~ 10298178 (+)
G1516129 NA non-coding downstream 45653 10298545 ~ 10298825 (+)
G1516131 NA non-coding downstream 47687 10300579 ~ 10301025 (+)
G1515853 NA other upstream 80600 10170102 ~ 10171956 (+)
G1515776 NA other upstream 277250 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1249430 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1572346 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1576045 8623967 ~ 8676626 (+)
G1516136 NA other downstream 66418 10310107 ~ 10327138 (+)
G1516637 NA other downstream 763873 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 833193 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1380175 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1389897 11642789 ~ 11643758 (+)

Expression


Co-expression Network