G1516108


Basic Information

Item Value
gene id G1516108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10262823 ~ 10263074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735350
CCCTCTGTCTATGTAGTTCCGGGGGGAAGTTTCCCCCAGGTacagatctagaatcagcttgCCCTCCTCCAATTCTAACCTCAAtcattagtgggggaaatgcaaaactgacccaagatcagcatctaggggcaacttcatccTACACTCTCTGTGTAGTAACAGTTTCACTACAGTATGAGTGGTGGGGATATTTAACAAGCAATTTCATAATGGTTTCAAAGGGATGGAATTACAATAAGCATCCACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735350 True 252 lncRNA 0.44 1 10262823 10263074

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 113694 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 128695 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 141013 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 369588 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 386929 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 99496 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 126554 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 593295 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 681329 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 697670 10960744 ~ 10967479 (+)
G1516094 NA non-coding upstream 9931 10252556 ~ 10252892 (+)
G1516079 NA non-coding upstream 23364 10238521 ~ 10239459 (+)
G1516074 NA non-coding upstream 30036 10232577 ~ 10232787 (+)
G1515874 NA non-coding upstream 33000 10229440 ~ 10229823 (+)
G1515871 NA non-coding upstream 39029 10223583 ~ 10223794 (+)
G1516126 NA non-coding downstream 25284 10288358 ~ 10288578 (+)
G1516128 NA non-coding downstream 33733 10296807 ~ 10298178 (+)
G1516129 NA non-coding downstream 35471 10298545 ~ 10298825 (+)
G1516131 NA non-coding downstream 37505 10300579 ~ 10301025 (+)
G1516136 NA non-coding downstream 47033 10310107 ~ 10327138 (+)
G1515853 NA other upstream 90867 10170102 ~ 10171956 (+)
G1515776 NA other upstream 287517 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1259697 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1582613 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1586312 8623967 ~ 8676626 (+)
G1516637 NA other downstream 753691 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 823011 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1369993 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1379715 11642789 ~ 11643758 (+)

Expression


Co-expression Network