G1516136


Basic Information

Item Value
gene id G1516136
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10310107 ~ 10327138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735391
gtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgggttgtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgt
>TU1735387
tgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtagggagagtaaagac
>TU1735386
tgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgttaggaggtagggagagtgaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtatgtgaggtagggagagtaaagac
>TU1735389
agtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatgtaaggaggtagggagggtgaagactgtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttttttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatgtaaggaggtagggagagtgaagacagtagtttgtgttgtatctaaggaggtagggagagtgaagacagtagtttgtgttgtttgtgttgtatctaaggaagtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatgtaaggaggtagggagagtaaagacagtagtttgtgttgtatctaaggaggtagggagagtaaagacagtagtttgtgttgtttgtgttgtatctaaggaggtagggagagtgagaaATGCTCCATTCCTTCCATGTCTTCCAGTAGTCTTATTGTAAATGAGTTGATTGATGTAATTGGTTCTGTATAATTACAATACAACAGTCCGGGACCTTAAACACCAGCCTGACGGCACAGTGTCCTGGACCTCTCCATGGCTATAACACCAGCCTGACGGCACAGTATCCTGGACCTCTCCTTGGCTATAACACCAGCCTGATGGTACAGTATCCTGGACCTCTCCATGGCTATAACACCAGCCTGAAGGCACAGTATCCTGGACCTCTCCATGGCTATAACACCAGCCTGACGGCACAGTATCCTGGACCTCTCCAAGGCTATAACACCAGCCTGACGGCACAGTATCCTGGACCTCTCCAAGGCTATAACACCAGCCTGACGGCACAGTTTCCTGGACCTCTCCATGGCTATAACACCAGCCTGACGGCACAGTATCCTGGACCTCTCCATGGCTATAACACCAGCCTGACAACACAGTATGCTGGACCTCTCCATGGCTTTAACACCAGCCTGAAGGCACAGTATCCTGGACCTCTCCATGGCTATAACACCAGCCTGACGGTTCAGTATCCTGGACCTCTCCATGGCTATAACACCAGCCTGACGGCACAGTATCCTGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106599156

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735391 False 243 lncRNA 0.40 4 10310107 10321653
TU1735387 False 348 lncRNA 0.41 5 10311935 10325865
TU1735386 False 324 lncRNA 0.41 4 10312499 10325865
TU1735389 True 1390 TUCP 0.46 3 10319310 10327138

Neighbor

gene id symbol gene type direction distance location
LOC118941088 LOC106575836 coding upstream 160978 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 175979 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 188297 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 416872 9887375 ~ 9893235 (+)
LOC110495581 LOC106575873 coding upstream 434213 9874710 ~ 9875894 (+)
LOC118941089 LOC106574813 coding downstream 36705 10362570 ~ 10368578 (+)
LOC110510737 LOC106575810 coding downstream 63763 10389628 ~ 10856330 (+)
LOC118941090 LOC106575811 coding downstream 530504 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 618538 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 634879 10960744 ~ 10967479 (+)
G1516131 NA non-coding upstream 9082 10300579 ~ 10301025 (+)
G1516129 NA non-coding upstream 11282 10298545 ~ 10298825 (+)
G1516128 NA non-coding upstream 11929 10296807 ~ 10298178 (+)
G1516126 NA non-coding upstream 21529 10288358 ~ 10288578 (+)
G1516108 NA non-coding upstream 47033 10262823 ~ 10263074 (+)
G1516145 NA non-coding downstream 10913 10336778 ~ 10337022 (+)
G1516154 NA non-coding downstream 26493 10352358 ~ 10352662 (+)
G1516169 NA non-coding downstream 71417 10397282 ~ 10397546 (+)
G1516172 NA non-coding downstream 76594 10402459 ~ 10402750 (+)
G1516174 NA non-coding downstream 84669 10410534 ~ 10410752 (+)
G1515853 NA other upstream 138151 10170102 ~ 10171956 (+)
G1515776 NA other upstream 334801 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1306981 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1629897 8677497 ~ 8682383 (+)
LOC110495394 LOC106574832 other upstream 1633596 8623967 ~ 8676626 (+)
G1516637 NA other downstream 690900 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 760220 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1307202 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1316924 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1614197 11940062 ~ 11941897 (+)

Expression


Co-expression Network