Gene
RNA
| Item | Value |
|---|---|
| gene id | G1516169 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 10397282 ~ 10397546 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1735434 | True | 265 | lncRNA | 0.46 | 1 | 10397282 | 10397546 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941089 | LOC106574813 | coding | upstream | 28704 | 10362570 ~ 10368578 (+) |
| LOC118941088 | LOC106575836 | coding | upstream | 248153 | 10146949 ~ 10149129 (+) |
| LOC110495585 | LOC106574888 | coding | upstream | 263154 | 10131530 ~ 10134128 (+) |
| LOC118941061 | NA | coding | upstream | 275472 | 10118660 ~ 10121810 (+) |
| LOC110495584 | LOC106574807 | coding | upstream | 504047 | 9887375 ~ 9893235 (+) |
| LOC118941090 | LOC106575811 | coding | downstream | 458823 | 10856369 ~ 10862119 (+) |
| LOC110527277 | LOC106575822 | coding | downstream | 546857 | 10944403 ~ 10956829 (+) |
| LOC118936256 | LOC100194643 | coding | downstream | 563198 | 10960744 ~ 10967479 (+) |
| LOC118941091 | NA | coding | downstream | 564239 | 10961785 ~ 10965666 (+) |
| LOC110527282 | acadl | coding | downstream | 576282 | 10973828 ~ 10979399 (+) |
| G1516154 | NA | non-coding | upstream | 44620 | 10352358 ~ 10352662 (+) |
| G1516145 | NA | non-coding | upstream | 60260 | 10336778 ~ 10337022 (+) |
| G1516136 | NA | non-coding | upstream | 71417 | 10310107 ~ 10327138 (+) |
| G1516131 | NA | non-coding | upstream | 96257 | 10300579 ~ 10301025 (+) |
| G1516129 | NA | non-coding | upstream | 98457 | 10298545 ~ 10298825 (+) |
| G1516172 | NA | non-coding | downstream | 4913 | 10402459 ~ 10402750 (+) |
| G1516174 | NA | non-coding | downstream | 12988 | 10410534 ~ 10410752 (+) |
| G1516178 | NA | non-coding | downstream | 16895 | 10414441 ~ 10414717 (+) |
| G1516179 | LOC106569275 | non-coding | downstream | 17211 | 10414757 ~ 10415193 (+) |
| G1516181 | NA | non-coding | downstream | 21911 | 10419457 ~ 10419810 (+) |
| G1515853 | NA | other | upstream | 225326 | 10170102 ~ 10171956 (+) |
| G1515776 | NA | other | upstream | 421976 | 9974528 ~ 9975306 (+) |
| G1515005 | cbs | other | upstream | 1394156 | 9000398 ~ 9003126 (+) |
| LOC110495395 | LOC106574852 | other | upstream | 1717072 | 8677497 ~ 8682383 (+) |
| G1516637 | NA | other | downstream | 619219 | 11016765 ~ 11017089 (+) |
| LOC118941092 | LOC106575823 | other | downstream | 688539 | 10978682 ~ 11092554 (+) |
| G1517015 | NA | other | downstream | 1235521 | 11633067 ~ 11634979 (+) |
| G1517019 | NA | other | downstream | 1245243 | 11642789 ~ 11643758 (+) |
| G1517150 | NA | other | downstream | 1542516 | 11940062 ~ 11941897 (+) |
