G1516197


Basic Information

Item Value
gene id G1516197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10441107 ~ 10441307 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735462
GCTAGGAGTGCAACACATGCAAcacacaaagacaagatcccaacacagaaggtgggaaaaagggctgccttagtttgatccccaatcagagacaacgatagacattTGCCtccgattgggaaccatactcggccaacaaagaaatagaaacatagatttaccaccctagtcacaccctgacctaccaaaTAGAGAGTGAca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735462 True 201 lncRNA 0.46 1 10441107 10441307

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 72529 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 291978 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 306979 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 319297 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 547872 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 415062 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 503096 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 519437 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 520478 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 532521 10973828 ~ 10979399 (+)
G1516187 NA non-coding upstream 15969 10424810 ~ 10425138 (+)
G1516181 NA non-coding upstream 21297 10419457 ~ 10419810 (+)
G1516179 LOC106569275 non-coding upstream 25914 10414757 ~ 10415193 (+)
G1516178 NA non-coding upstream 26390 10414441 ~ 10414717 (+)
G1516174 NA non-coding upstream 30355 10410534 ~ 10410752 (+)
G1516198 NA non-coding downstream 139 10441446 ~ 10441669 (+)
G1516202 NA non-coding downstream 3760 10445067 ~ 10445268 (+)
G1516206 NA non-coding downstream 8276 10449583 ~ 10449785 (+)
G1516207 NA non-coding downstream 9722 10451029 ~ 10451323 (+)
G1516209 NA non-coding downstream 14310 10455617 ~ 10456361 (+)
G1516136 NA other upstream 113969 10310107 ~ 10327138 (+)
G1515853 NA other upstream 269151 10170102 ~ 10171956 (+)
G1515776 NA other upstream 465801 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1437981 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 1760897 8677497 ~ 8682383 (+)
G1516637 NA other downstream 575458 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 644778 10978682 ~ 11092554 (+)
G1517015 NA other downstream 1191760 11633067 ~ 11634979 (+)
G1517019 NA other downstream 1201482 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1498755 11940062 ~ 11941897 (+)

Expression


Co-expression Network