G1516446


Basic Information

Item Value
gene id G1516446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10710031 ~ 10786184 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735773
cacagaAGATATTACAtggtgttttggagagagagagagacagagagagagagtaacagagagagagagacagagagagagagtaacagagagagagagacagagagagagagtgagagagagagagacagagagagagagagagagagacagagagagagagtgagagagagagagtgagagagagagatgcgacagagagatagacagagattagacagagagagagagtaacagagagagagagacagagagagagagtaacagagagagagacagagagagagagtgagagagagagagacagagagagagagtgagagagagagagagagagagagagagagtgagagagagagagtgagagagagagatgcgacagagagatagacagagattagacagagagactgagagatatCTATATCTCCTCTATAtttcctctcaattcaattcaaggggcttcattggcatgggaaacgtgttaacattgccaaagcaagtgaggtaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735773 True 512 lncRNA 0.46 4 10710031 10786184

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 341453 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 560902 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 575903 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 588221 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 816796 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 70185 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 158219 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 174560 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 175601 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 187644 10973828 ~ 10979399 (+)
G1516443 NA non-coding upstream 4770 10705018 ~ 10705261 (+)
G1516435 NA non-coding upstream 14313 10695518 ~ 10695718 (+)
G1516433 NA non-coding upstream 14716 10694511 ~ 10695315 (+)
G1516432 NA non-coding upstream 15669 10693970 ~ 10694362 (+)
G1516431 NA non-coding upstream 16706 10693104 ~ 10693325 (+)
G1516499 NA non-coding downstream 46360 10832544 ~ 10833073 (+)
G1516502 NA non-coding downstream 50734 10836918 ~ 10837240 (+)
G1516567 NA non-coding downstream 81101 10867285 ~ 10867629 (+)
G1516569 NA non-coding downstream 81832 10868016 ~ 10868225 (+)
G1516136 NA other upstream 382893 10310107 ~ 10327138 (+)
G1515853 NA other upstream 538075 10170102 ~ 10171956 (+)
G1515776 NA other upstream 734725 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1706905 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2029821 8677497 ~ 8682383 (+)
G1516637 NA other downstream 230581 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 299901 10978682 ~ 11092554 (+)
G1517015 NA other downstream 846883 11633067 ~ 11634979 (+)
G1517019 NA other downstream 856605 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1153878 11940062 ~ 11941897 (+)

Expression


Co-expression Network