G1516499


Basic Information

Item Value
gene id G1516499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10832544 ~ 10833073 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735834
cctgttttcacttcgtcatgatagggtattgtgatgtcatgatggggtattgtgatgtcatgatggggtattgtgatgtcatgatggggtattgtgatgtcatgatggggtattgtgatgtcatgatggggtattgcgatgtcatgatggggtattgcgatgtcatgatggggtattgcgatgtcatgatggggtattgcgatgtcatgatggggtattgtgatgtcatgatgggg

Function

NR:

description
PREDICTED: splicing factor 3A subunit 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735834 True 236 lncRNA 0.45 2 10832544 10833073

Neighbor

gene id symbol gene type direction distance location
LOC118941089 LOC106574813 coding upstream 463966 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 683415 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 698416 10131530 ~ 10134128 (+)
LOC118941061 NA coding upstream 710734 10118660 ~ 10121810 (+)
LOC110495584 LOC106574807 coding upstream 939309 9887375 ~ 9893235 (+)
LOC118941090 LOC106575811 coding downstream 23296 10856369 ~ 10862119 (+)
LOC110527277 LOC106575822 coding downstream 111330 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 127671 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 128712 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 140755 10973828 ~ 10979399 (+)
G1516446 NA non-coding upstream 46360 10710031 ~ 10786184 (+)
G1516443 NA non-coding upstream 127283 10705018 ~ 10705261 (+)
G1516435 NA non-coding upstream 136826 10695518 ~ 10695718 (+)
G1516433 NA non-coding upstream 137229 10694511 ~ 10695315 (+)
G1516432 NA non-coding upstream 138182 10693970 ~ 10694362 (+)
G1516502 NA non-coding downstream 3845 10836918 ~ 10837240 (+)
G1516567 NA non-coding downstream 34212 10867285 ~ 10867629 (+)
G1516569 NA non-coding downstream 34943 10868016 ~ 10868225 (+)
G1516573 NA non-coding downstream 44492 10877565 ~ 10877791 (+)
G1516136 NA other upstream 505406 10310107 ~ 10327138 (+)
G1515853 NA other upstream 660588 10170102 ~ 10171956 (+)
G1515776 NA other upstream 857238 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1829418 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2152334 8677497 ~ 8682383 (+)
G1516637 NA other downstream 183692 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 253012 10978682 ~ 11092554 (+)
G1517015 NA other downstream 799994 11633067 ~ 11634979 (+)
G1517019 NA other downstream 809716 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1106989 11940062 ~ 11941897 (+)

Expression


Co-expression Network