G1516567


Basic Information

Item Value
gene id G1516567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10867285 ~ 10867629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735915
cagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaacccttccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735915 True 345 lncRNA 0.44 1 10867285 10867629

Neighbor

gene id symbol gene type direction distance location
LOC118941090 LOC106575811 coding upstream 5166 10856369 ~ 10862119 (+)
LOC110510737 LOC106575810 coding upstream 10955 10389628 ~ 10856330 (+)
LOC118941089 LOC106574813 coding upstream 498707 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 718156 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 733157 10131530 ~ 10134128 (+)
LOC110527277 LOC106575822 coding downstream 76774 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 93115 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 94156 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 106199 10973828 ~ 10979399 (+)
LOC118941092 LOC106575823 coding downstream 111053 10978682 ~ 11092554 (+)
G1516502 NA non-coding upstream 30045 10836918 ~ 10837240 (+)
G1516499 NA non-coding upstream 34212 10832544 ~ 10833073 (+)
G1516446 NA non-coding upstream 81101 10710031 ~ 10786184 (+)
G1516443 NA non-coding upstream 162024 10705018 ~ 10705261 (+)
G1516569 NA non-coding downstream 387 10868016 ~ 10868225 (+)
G1516573 NA non-coding downstream 9936 10877565 ~ 10877791 (+)
G1516574 NA non-coding downstream 18613 10886242 ~ 10886456 (+)
G1516589 NA non-coding downstream 40646 10908275 ~ 10908498 (+)
G1516596 NA non-coding downstream 55995 10923624 ~ 10925080 (+)
G1516136 NA other upstream 540147 10310107 ~ 10327138 (+)
G1515853 NA other upstream 695329 10170102 ~ 10171956 (+)
G1515776 NA other upstream 891979 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1864159 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2187075 8677497 ~ 8682383 (+)
G1516637 NA other downstream 149136 11016765 ~ 11017089 (+)
G1517015 NA other downstream 765438 11633067 ~ 11634979 (+)
G1517019 NA other downstream 775160 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1072433 11940062 ~ 11941897 (+)

Expression


Co-expression Network