G1516589


Basic Information

Item Value
gene id G1516589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10908275 ~ 10908498 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735941
cttcctaacctcctgctaaatgtatgaccatattagagacacatatttccctcagattacacagatccacaaagaattcggaagcaaatccaattttgattaactcccatatctactgggtgaaataccacaatgtgacatcacagcagcaagattttggacctgttgccacaagaaaaccagtgaagaacaaacaccattgtaaatacaacccatatttatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735941 True 224 lncRNA 0.38 1 10908275 10908498

Neighbor

gene id symbol gene type direction distance location
LOC118941090 LOC106575811 coding upstream 46156 10856369 ~ 10862119 (+)
LOC110510737 LOC106575810 coding upstream 51945 10389628 ~ 10856330 (+)
LOC118941089 LOC106574813 coding upstream 539697 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 759146 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 774147 10131530 ~ 10134128 (+)
LOC110527277 LOC106575822 coding downstream 35905 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 52246 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 53287 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 65330 10973828 ~ 10979399 (+)
LOC118941092 LOC106575823 coding downstream 70184 10978682 ~ 11092554 (+)
G1516574 NA non-coding upstream 21819 10886242 ~ 10886456 (+)
G1516573 NA non-coding upstream 30484 10877565 ~ 10877791 (+)
G1516569 NA non-coding upstream 40050 10868016 ~ 10868225 (+)
G1516567 NA non-coding upstream 40646 10867285 ~ 10867629 (+)
G1516596 NA non-coding downstream 15126 10923624 ~ 10925080 (+)
G1516597 NA non-coding downstream 15581 10924079 ~ 10924953 (+)
G1516622 NA non-coding downstream 82567 10991065 ~ 10991966 (+)
G1516634 NA non-coding downstream 103660 11012158 ~ 11012391 (+)
G1516136 NA other upstream 581137 10310107 ~ 10327138 (+)
G1515853 NA other upstream 736319 10170102 ~ 10171956 (+)
G1515776 NA other upstream 932969 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1905149 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2228065 8677497 ~ 8682383 (+)
G1516637 NA other downstream 108267 11016765 ~ 11017089 (+)
G1517015 NA other downstream 724569 11633067 ~ 11634979 (+)
G1517019 NA other downstream 734291 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1031564 11940062 ~ 11941897 (+)

Expression


Co-expression Network