G1516597


Basic Information

Item Value
gene id G1516597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 10924079 ~ 10924953 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735950
GTATGTTCAATGTCTATACAAGGTGTGTACTGCCTGTTTGGACTGGTATGTTCAATGTCTATACAAGGACTGTACTGCCTGTTTGGACTGGTATGTTCAATGTCTATACAAGGTGTGTACTGTCTGTTTGGACTGGTATGTTCAATGTCTATACAAGGTGTGTACTGCCTGTTTGGACTAGTATGTTCAATGTCTATACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735950 True 200 lncRNA 0.40 2 10924079 10924953

Neighbor

gene id symbol gene type direction distance location
LOC118941090 LOC106575811 coding upstream 61960 10856369 ~ 10862119 (+)
LOC110510737 LOC106575810 coding upstream 67749 10389628 ~ 10856330 (+)
LOC118941089 LOC106574813 coding upstream 555501 10362570 ~ 10368578 (+)
LOC118941088 LOC106575836 coding upstream 774950 10146949 ~ 10149129 (+)
LOC110495585 LOC106574888 coding upstream 789951 10131530 ~ 10134128 (+)
LOC110527277 LOC106575822 coding downstream 19450 10944403 ~ 10956829 (+)
LOC118936256 LOC100194643 coding downstream 35791 10960744 ~ 10967479 (+)
LOC118941091 NA coding downstream 36832 10961785 ~ 10965666 (+)
LOC110527282 acadl coding downstream 48875 10973828 ~ 10979399 (+)
LOC118941092 LOC106575823 coding downstream 53729 10978682 ~ 11092554 (+)
G1516589 NA non-coding upstream 15581 10908275 ~ 10908498 (+)
G1516574 NA non-coding upstream 37623 10886242 ~ 10886456 (+)
G1516573 NA non-coding upstream 46288 10877565 ~ 10877791 (+)
G1516569 NA non-coding upstream 55854 10868016 ~ 10868225 (+)
G1516567 NA non-coding upstream 56450 10867285 ~ 10867629 (+)
G1516622 NA non-coding downstream 66112 10991065 ~ 10991966 (+)
G1516634 NA non-coding downstream 87205 11012158 ~ 11012391 (+)
G1516638 NA non-coding downstream 92236 11017189 ~ 11017403 (+)
G1516639 NA non-coding downstream 92612 11017565 ~ 11018491 (+)
G1516136 NA other upstream 596941 10310107 ~ 10327138 (+)
G1515853 NA other upstream 752123 10170102 ~ 10171956 (+)
G1515776 NA other upstream 948773 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 1920953 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2243869 8677497 ~ 8682383 (+)
G1516637 NA other downstream 91812 11016765 ~ 11017089 (+)
G1517015 NA other downstream 708114 11633067 ~ 11634979 (+)
G1517019 NA other downstream 717836 11642789 ~ 11643758 (+)
G1517150 NA other downstream 1015109 11940062 ~ 11941897 (+)

Expression


Co-expression Network