G1516634


Basic Information

Item Value
gene id G1516634
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11012158 ~ 11012391 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735989
CCCATTGACCAGGGGGTATTGTGGTCATTCCTCCAGTTAGGCCCAGTGTGTGTCCACCAGTATTCAGGTCCTGGAACCTCATGCTTGGGTACTAATGTGGACCAGATGGGGCCATGAGAGGGCTCGATGTAGGGTCTAGGAGCCTCACAGGAAAGACTTAGCagagacaacatgacaacatgcctCCTACAAATTACAGCTATTAACCCCCCACGCTAAAGACATACCCCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735989 True 234 lncRNA 0.52 1 11012158 11012391

Neighbor

gene id symbol gene type direction distance location
LOC110527282 acadl coding upstream 32759 10973828 ~ 10979399 (+)
LOC118936256 LOC100194643 coding upstream 44679 10960744 ~ 10967479 (+)
LOC118941091 NA coding upstream 46492 10961785 ~ 10965666 (+)
LOC110527277 LOC106575822 coding upstream 55329 10944403 ~ 10956829 (+)
LOC118941090 LOC106575811 coding upstream 150039 10856369 ~ 10862119 (+)
LOC110514120 NA coding downstream 81195 11093586 ~ 11189284 (+)
LOC110527285 LOC106574778 coding downstream 201122 11213513 ~ 11214997 (+)
LOC110495609 LOC106590510 coding downstream 350220 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 440623 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 737338 11749729 ~ 11759288 (+)
G1516622 NA non-coding upstream 20192 10991065 ~ 10991966 (+)
G1516596 NA non-coding upstream 87078 10923624 ~ 10925080 (+)
G1516597 NA non-coding upstream 87205 10924079 ~ 10924953 (+)
G1516589 NA non-coding upstream 103660 10908275 ~ 10908498 (+)
G1516638 NA non-coding downstream 4798 11017189 ~ 11017403 (+)
G1516639 NA non-coding downstream 5174 11017565 ~ 11018491 (+)
G1516640 NA non-coding downstream 7478 11019869 ~ 11020286 (+)
G1516660 NA non-coding downstream 66655 11079046 ~ 11079822 (+)
G1516683 NA non-coding downstream 179931 11192322 ~ 11194769 (+)
G1516136 NA other upstream 685020 10310107 ~ 10327138 (+)
G1515853 NA other upstream 840202 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1036852 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 2009032 9000398 ~ 9003126 (+)
LOC110495395 LOC106574852 other upstream 2331948 8677497 ~ 8682383 (+)
G1516637 NA other downstream 4374 11016765 ~ 11017089 (+)
LOC118941092 LOC106575823 other downstream 73694 10978682 ~ 11092554 (+)
G1517015 NA other downstream 620676 11633067 ~ 11634979 (+)
G1517019 NA other downstream 630398 11642789 ~ 11643758 (+)
G1517150 NA other downstream 927671 11940062 ~ 11941897 (+)

Expression


Co-expression Network