G1516638


Basic Information

Item Value
gene id G1516638
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11017189 ~ 11017403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1735993
acctatcactctctacctacctatccctctctacctacctatcactctctacctacctatccctctctacctacctatcactctctacctacctatcactctctacctacctatcattCTCTACCTatatatcactctctacctacctatccctctctacctacctatcactctATACCTatatatcactctctacctacTGATCACTCTTTACC

Function

NR:

description
PREDICTED: early nodulin-75-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1735993 True 215 lncRNA 0.43 1 11017189 11017403

Neighbor

gene id symbol gene type direction distance location
LOC110527282 acadl coding upstream 37790 10973828 ~ 10979399 (+)
LOC118936256 LOC100194643 coding upstream 49710 10960744 ~ 10967479 (+)
LOC118941091 NA coding upstream 51523 10961785 ~ 10965666 (+)
LOC110527277 LOC106575822 coding upstream 60360 10944403 ~ 10956829 (+)
LOC118941090 LOC106575811 coding upstream 155070 10856369 ~ 10862119 (+)
LOC110514120 NA coding downstream 76183 11093586 ~ 11189284 (+)
LOC110527285 LOC106574778 coding downstream 196110 11213513 ~ 11214997 (+)
LOC110495609 LOC106590510 coding downstream 345208 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 435611 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 732326 11749729 ~ 11759288 (+)
G1516634 NA non-coding upstream 4798 11012158 ~ 11012391 (+)
G1516622 NA non-coding upstream 25223 10991065 ~ 10991966 (+)
G1516596 NA non-coding upstream 92109 10923624 ~ 10925080 (+)
G1516597 NA non-coding upstream 92236 10924079 ~ 10924953 (+)
G1516639 NA non-coding downstream 162 11017565 ~ 11018491 (+)
G1516640 NA non-coding downstream 2466 11019869 ~ 11020286 (+)
G1516660 NA non-coding downstream 61643 11079046 ~ 11079822 (+)
G1516683 NA non-coding downstream 174919 11192322 ~ 11194769 (+)
G1516637 NA other upstream 100 11016765 ~ 11017089 (+)
G1516136 NA other upstream 690051 10310107 ~ 10327138 (+)
G1515853 NA other upstream 845233 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1041883 9974528 ~ 9975306 (+)
G1515005 cbs other upstream 2014063 9000398 ~ 9003126 (+)
LOC118941092 LOC106575823 other downstream 68682 10978682 ~ 11092554 (+)
G1517015 NA other downstream 615664 11633067 ~ 11634979 (+)
G1517019 NA other downstream 625386 11642789 ~ 11643758 (+)
G1517150 NA other downstream 922659 11940062 ~ 11941897 (+)
G1517414 LOC106575752 other downstream 1816248 12833651 ~ 12872163 (+)

Expression


Co-expression Network