G1516693


Basic Information

Item Value
gene id G1516693
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11221665 ~ 11222237 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736052
TCAACTATTTTCCTCAGTCTGACTTCTGCAATACAAACAGACAGCTGACTTTGAATCAACAGCATGAAATTCTAATAGTTGGTTAGTAAAAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTTGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGGGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTGAGTAGTCGAGATCAGTAATAGAGTAGTTTTGTACGTCAACATTTACCACACA

Function

NR:

description
PREDICTED: mucin-20-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736052 True 543 lncRNA 0.37 2 11221665 11222237

Neighbor

gene id symbol gene type direction distance location
LOC110527285 LOC106574778 coding upstream 6668 11213513 ~ 11214997 (+)
LOC110514120 NA coding upstream 32381 11093586 ~ 11189284 (+)
LOC118941092 LOC106575823 coding upstream 131036 10978682 ~ 11092554 (+)
LOC110527282 acadl coding upstream 242266 10973828 ~ 10979399 (+)
LOC118941091 NA coding upstream 255999 10961785 ~ 10965666 (+)
LOC110495609 LOC106590510 coding downstream 140374 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 230777 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 527492 11749729 ~ 11759288 (+)
LOC110495622 LOC106575786 coding downstream 544126 11766363 ~ 11772739 (+)
LOC110495619 slc19a2 coding downstream 550877 11773114 ~ 11779870 (+)
G1516694 NA non-coding upstream 4909 11216258 ~ 11216756 (+)
G1516683 NA non-coding upstream 26896 11192322 ~ 11194769 (+)
G1516660 NA non-coding upstream 141843 11079046 ~ 11079822 (+)
G1516640 NA non-coding upstream 201379 11019869 ~ 11020286 (+)
G1516699 NA non-coding downstream 7483 11229720 ~ 11231308 (+)
G1516702 NA non-coding downstream 17024 11239261 ~ 11239673 (+)
G1516862 NA non-coding downstream 85993 11308230 ~ 11309024 (+)
G1516875 NA non-coding downstream 98191 11320428 ~ 11320676 (+)
G1516891 NA non-coding downstream 114002 11336239 ~ 11339456 (+)
G1516637 NA other upstream 204576 11016765 ~ 11017089 (+)
G1516136 NA other upstream 894527 10310107 ~ 10327138 (+)
G1515853 NA other upstream 1049709 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1246359 9974528 ~ 9975306 (+)
G1517015 NA other downstream 410830 11633067 ~ 11634979 (+)
G1517019 NA other downstream 420552 11642789 ~ 11643758 (+)
G1517150 NA other downstream 717825 11940062 ~ 11941897 (+)
G1517414 LOC106575752 other downstream 1611414 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1712417 12934654 ~ 12936278 (+)

Expression


Co-expression Network