G1516699


Basic Information

Item Value
gene id G1516699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11229720 ~ 11231308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736064
GgactatacgacttgggaggaaatagacaggtgggcggtcgacccagggagagtgccataAACTTACCTAGACTACTTCACTAAACCACAATCCCATTACCTACAAAAAACccatagacaaaacacaccacataaatacccatgtcacaccctggcctgaccaaaataataaagaaaatactaaggccagggcgtgacaccgtcTCTGTATATCCACACACTGCATCACAACAAGCATCATAGAGTCATGCTTAACCCTCTCTGGATCACCATCTGATTCTGAGCCACGGAAccactggacactacagactTACTCATATTATATCTACTGGACACTACAGACTTACTCATATTATatccactggacactacagactTACTCATATTAATatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagacttactcatatcatatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagagtTACTCATatccactggacactacagactTACTCATATTATatccactggacactacagagttACTCATATTATATCCACCGGACACTACAGACTTACTCATATTATatccactggacactacagagttAGTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagactTACTCATATTATatccactggacactacagagttactcatatca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736064 True 912 lncRNA 0.40 2 11229720 11231308

Neighbor

gene id symbol gene type direction distance location
LOC110527285 LOC106574778 coding upstream 14723 11213513 ~ 11214997 (+)
LOC110514120 NA coding upstream 40436 11093586 ~ 11189284 (+)
LOC118941092 LOC106575823 coding upstream 139091 10978682 ~ 11092554 (+)
LOC110527282 acadl coding upstream 250321 10973828 ~ 10979399 (+)
LOC118941091 NA coding upstream 264054 10961785 ~ 10965666 (+)
LOC110495609 LOC106590510 coding downstream 131303 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 221706 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 518421 11749729 ~ 11759288 (+)
LOC110495622 LOC106575786 coding downstream 535055 11766363 ~ 11772739 (+)
LOC110495619 slc19a2 coding downstream 541806 11773114 ~ 11779870 (+)
G1516693 NA non-coding upstream 7483 11221665 ~ 11222237 (+)
G1516694 NA non-coding upstream 12964 11216258 ~ 11216756 (+)
G1516683 NA non-coding upstream 34951 11192322 ~ 11194769 (+)
G1516660 NA non-coding upstream 149898 11079046 ~ 11079822 (+)
G1516702 NA non-coding downstream 7953 11239261 ~ 11239673 (+)
G1516862 NA non-coding downstream 76922 11308230 ~ 11309024 (+)
G1516875 NA non-coding downstream 89120 11320428 ~ 11320676 (+)
G1516891 NA non-coding downstream 104931 11336239 ~ 11339456 (+)
G1516899 NA non-coding downstream 109080 11340388 ~ 11341350 (+)
G1516637 NA other upstream 212631 11016765 ~ 11017089 (+)
G1516136 NA other upstream 902582 10310107 ~ 10327138 (+)
G1515853 NA other upstream 1057764 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1254414 9974528 ~ 9975306 (+)
G1517015 NA other downstream 401759 11633067 ~ 11634979 (+)
G1517019 NA other downstream 411481 11642789 ~ 11643758 (+)
G1517150 NA other downstream 708754 11940062 ~ 11941897 (+)
G1517414 LOC106575752 other downstream 1602343 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1703346 12934654 ~ 12936278 (+)

Expression


Co-expression Network