G1516862



Basic Information


Item Value
gene id G1516862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11308230 ~ 11309024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1736292
CATTAGCCACGTGGGTGTAATCATGTCAACATGCTGGATATGGCTTAGAGAAGAAGATGGGGCCGATCGTCTGTAGTTTAGGACAGACACACAGTATACTGACTGTCATCTCTACCTGCACTGGTTCACAGGTACTGTAGTTTAGGACAGACACACAGTATACTGACGGTCATCTCTACCTGTACTGGTTCACAGTTACTGTAGTTTAGGACAGACACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1736292 True 219 lncRNA 0.46 2 11308230 11309024

Neighbor


gene id symbol gene type direction distance location
LOC110527285 LOC106574778 coding upstream 93233 11213513 ~ 11214997 (+)
LOC110514120 NA coding upstream 118946 11093586 ~ 11189284 (+)
LOC118941092 LOC106575823 coding upstream 217601 10978682 ~ 11092554 (+)
LOC110527282 acadl coding upstream 328831 10973828 ~ 10979399 (+)
LOC118941091 NA coding upstream 342564 10961785 ~ 10965666 (+)
LOC110495609 LOC106590510 coding downstream 53587 11362611 ~ 11420903 (+)
LOC110528750 LOC106575767 coding downstream 143990 11453014 ~ 11456879 (+)
LOC110495615 LOC106574963 coding downstream 440705 11749729 ~ 11759288 (+)
LOC110495622 LOC106575786 coding downstream 457339 11766363 ~ 11772739 (+)
LOC110495619 slc19a2 coding downstream 464090 11773114 ~ 11779870 (+)
G1516702 NA non-coding upstream 68557 11239261 ~ 11239673 (+)
G1516699 NA non-coding upstream 76922 11229720 ~ 11231308 (+)
G1516693 NA non-coding upstream 85993 11221665 ~ 11222237 (+)
G1516694 NA non-coding upstream 91474 11216258 ~ 11216756 (+)
G1516875 NA non-coding downstream 11404 11320428 ~ 11320676 (+)
G1516891 NA non-coding downstream 27215 11336239 ~ 11339456 (+)
G1516899 NA non-coding downstream 31364 11340388 ~ 11341350 (+)
G1516911 NA non-coding downstream 44425 11353449 ~ 11389130 (+)
G1516960 NA non-coding downstream 204065 11513089 ~ 11513506 (+)
G1516637 NA other upstream 291141 11016765 ~ 11017089 (+)
G1516136 NA other upstream 981092 10310107 ~ 10327138 (+)
G1515853 NA other upstream 1136274 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1332924 9974528 ~ 9975306 (+)
G1517015 NA other downstream 324043 11633067 ~ 11634979 (+)
G1517019 NA other downstream 333765 11642789 ~ 11643758 (+)
G1517150 NA other downstream 631038 11940062 ~ 11941897 (+)
G1517414 LOC106575752 other downstream 1524627 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1625630 12934654 ~ 12936278 (+)

Expression



Co-expression Network