Gene
RNA
| Item | Value |
|---|---|
| gene id | G1516960 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 11513089 ~ 11513506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736422 | False | 212 | lncRNA | 0.40 | 2 | 11513089 | 11513328 |
| TU1736423 | True | 240 | lncRNA | 0.41 | 3 | 11513089 | 11513506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528750 | LOC106575767 | coding | upstream | 56210 | 11453014 ~ 11456879 (+) |
| LOC110495609 | LOC106590510 | coding | upstream | 92186 | 11362611 ~ 11420903 (+) |
| LOC110527285 | LOC106574778 | coding | upstream | 298092 | 11213513 ~ 11214997 (+) |
| LOC110514120 | NA | coding | upstream | 323805 | 11093586 ~ 11189284 (+) |
| LOC118941092 | LOC106575823 | coding | upstream | 422460 | 10978682 ~ 11092554 (+) |
| LOC110495615 | LOC106574963 | coding | downstream | 236223 | 11749729 ~ 11759288 (+) |
| LOC110495622 | LOC106575786 | coding | downstream | 252857 | 11766363 ~ 11772739 (+) |
| LOC110495619 | slc19a2 | coding | downstream | 259608 | 11773114 ~ 11779870 (+) |
| LOC118941042 | LOC105005823 | coding | downstream | 278095 | 11791601 ~ 11802738 (+) |
| LOC110495630 | LOC106575789 | coding | downstream | 289671 | 11803177 ~ 11808380 (+) |
| G1516911 | NA | non-coding | upstream | 123959 | 11353449 ~ 11389130 (+) |
| G1516899 | NA | non-coding | upstream | 171739 | 11340388 ~ 11341350 (+) |
| G1516891 | NA | non-coding | upstream | 173633 | 11336239 ~ 11339456 (+) |
| G1516875 | NA | non-coding | upstream | 192413 | 11320428 ~ 11320676 (+) |
| G1516862 | NA | non-coding | upstream | 204065 | 11308230 ~ 11309024 (+) |
| G1516961 | NA | non-coding | downstream | 331 | 11513837 ~ 11515942 (+) |
| G1516975 | NA | non-coding | downstream | 34892 | 11548398 ~ 11548669 (+) |
| G1516998 | NA | non-coding | downstream | 81156 | 11594662 ~ 11595011 (+) |
| G1516999 | NA | non-coding | downstream | 83786 | 11597292 ~ 11597705 (+) |
| G1517002 | NA | non-coding | downstream | 94742 | 11608248 ~ 11608843 (+) |
| G1516637 | NA | other | upstream | 496000 | 11016765 ~ 11017089 (+) |
| G1516136 | NA | other | upstream | 1185951 | 10310107 ~ 10327138 (+) |
| G1515853 | NA | other | upstream | 1341133 | 10170102 ~ 10171956 (+) |
| G1515776 | NA | other | upstream | 1537783 | 9974528 ~ 9975306 (+) |
| G1517015 | NA | other | downstream | 119561 | 11633067 ~ 11634979 (+) |
| G1517019 | NA | other | downstream | 129283 | 11642789 ~ 11643758 (+) |
| G1517150 | NA | other | downstream | 426556 | 11940062 ~ 11941897 (+) |
| G1517414 | LOC106575752 | other | downstream | 1320145 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 1421148 | 12934654 ~ 12936278 (+) |
