G1517010


Basic Information

Item Value
gene id G1517010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11624596 ~ 11625278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736480
TCCCTGGCCGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGGCTGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGGTTGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGGCTGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGACCGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGGCTGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGGCTGTGAGGCTACTGGCTAGGTGTAATATCTCCCTGACCGTGAGGCTACTGGCTAGGTGTAATAT

Function

NR:

description
PH-interacting protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736480 True 287 lncRNA 0.53 2 11624596 11625278

Neighbor

gene id symbol gene type direction distance location
LOC110528750 LOC106575767 coding upstream 167717 11453014 ~ 11456879 (+)
LOC110495609 LOC106590510 coding upstream 203693 11362611 ~ 11420903 (+)
LOC110527285 LOC106574778 coding upstream 409599 11213513 ~ 11214997 (+)
LOC110514120 NA coding upstream 435312 11093586 ~ 11189284 (+)
LOC118941092 LOC106575823 coding upstream 533967 10978682 ~ 11092554 (+)
LOC110495615 LOC106574963 coding downstream 124451 11749729 ~ 11759288 (+)
LOC110495622 LOC106575786 coding downstream 141085 11766363 ~ 11772739 (+)
LOC110495619 slc19a2 coding downstream 147836 11773114 ~ 11779870 (+)
LOC118941042 LOC105005823 coding downstream 166323 11791601 ~ 11802738 (+)
LOC110495630 LOC106575789 coding downstream 177899 11803177 ~ 11808380 (+)
G1517002 NA non-coding upstream 15753 11608248 ~ 11608843 (+)
G1516999 NA non-coding upstream 26891 11597292 ~ 11597705 (+)
G1516998 NA non-coding upstream 29585 11594662 ~ 11595011 (+)
G1516975 NA non-coding upstream 75927 11548398 ~ 11548669 (+)
G1516961 NA non-coding upstream 108654 11513837 ~ 11515942 (+)
G1517014 NA non-coding downstream 7259 11632537 ~ 11652279 (+)
G1517042 NA non-coding downstream 80274 11705552 ~ 11764757 (+)
G1517073 NA non-coding downstream 131978 11757256 ~ 11757966 (+)
G1517065 rgn non-coding downstream 192077 11817355 ~ 11820418 (+)
G1517095 NA non-coding downstream 212066 11837344 ~ 11837614 (+)
G1516637 NA other upstream 607507 11016765 ~ 11017089 (+)
G1516136 NA other upstream 1297458 10310107 ~ 10327138 (+)
G1515853 NA other upstream 1452640 10170102 ~ 10171956 (+)
G1515776 NA other upstream 1649290 9974528 ~ 9975306 (+)
G1517015 NA other downstream 7789 11633067 ~ 11634979 (+)
G1517019 NA other downstream 17511 11642789 ~ 11643758 (+)
G1517150 NA other downstream 314784 11940062 ~ 11941897 (+)
G1517414 LOC106575752 other downstream 1208373 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1309376 12934654 ~ 12936278 (+)

Expression


Co-expression Network