G1517073


Basic Information

Item Value
gene id G1517073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11757256 ~ 11757966 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736553
GGTTTTGAGCCTGTTGTAGACAATGTGGTCAACTAACTACTCATGTTGGTCTCGTACTGATGAAAAACTGGGTTCTTAGTTTGGGAGGACAGGCTATTGTTTAGCTGCCAACACAGTCTTTCTGTGGAGGACATTAATAGTACTGGGATGAAAGATTTGCAAATTAGAAACATTTGTAATTTGGGGAAAGGAATCTAGCGGGCACAGTGAAAATAATTAATCAAGACCGTTGAGCTTCAGTTGTATGCATGTCTTTAGTACTTCTACTGGGAAATGTTTCATGGACTCAGTTTGGCCACACtcttagacagagagagaggtcattcTGTGTAGTATAATACTGTATCCTCCATTATGTATAGTataatactgtaccctccattctgtgtagtataatactgtaccctccattctgtgtagtattatactgtaccctccattctgtgtagtattatactgtaccctccattctgtgtagtataatactgtaccctccattctgtgtagtataatactgtaccctccattctactaccctgtatagtattatactgtaccctccattctgtgtagtataatactgtaccctccattctgtgtagtataatactgtaccctccattctgtatagtattatactgtaccctccattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736553 True 653 lncRNA 0.39 2 11757256 11757966

Neighbor

gene id symbol gene type direction distance location
LOC110528750 LOC106575767 coding upstream 300377 11453014 ~ 11456879 (+)
LOC110495609 LOC106590510 coding upstream 336353 11362611 ~ 11420903 (+)
LOC110527285 LOC106574778 coding upstream 542259 11213513 ~ 11214997 (+)
LOC110514120 NA coding upstream 567972 11093586 ~ 11189284 (+)
LOC118941092 LOC106575823 coding upstream 666627 10978682 ~ 11092554 (+)
LOC110495622 LOC106575786 coding downstream 8397 11766363 ~ 11772739 (+)
LOC110495619 slc19a2 coding downstream 15148 11773114 ~ 11779870 (+)
LOC118941042 LOC105005823 coding downstream 33635 11791601 ~ 11802738 (+)
LOC110495630 LOC106575789 coding downstream 45211 11803177 ~ 11808380 (+)
trnas-cga-32 NA coding downstream 50943 11808909 ~ 11808990 (+)
G1517014 NA non-coding upstream 104977 11632537 ~ 11652279 (+)
G1517010 NA non-coding upstream 131978 11624596 ~ 11625278 (+)
G1517002 NA non-coding upstream 148413 11608248 ~ 11608843 (+)
G1516999 NA non-coding upstream 159551 11597292 ~ 11597705 (+)
G1516998 NA non-coding upstream 162245 11594662 ~ 11595011 (+)
G1517065 rgn non-coding downstream 59389 11817355 ~ 11820418 (+)
G1517095 NA non-coding downstream 79378 11837344 ~ 11837614 (+)
G1517060 NA non-coding downstream 80561 11838527 ~ 11841346 (+)
G1517101 NA non-coding downstream 103406 11861372 ~ 11862045 (+)
G1517150 NA non-coding downstream 182096 11940062 ~ 11941897 (+)
G1517019 NA other upstream 113498 11642789 ~ 11643758 (+)
G1517015 NA other upstream 122277 11633067 ~ 11634979 (+)
G1516637 NA other upstream 740167 11016765 ~ 11017089 (+)
G1516136 NA other upstream 1430118 10310107 ~ 10327138 (+)
G1517414 LOC106575752 other downstream 1075685 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1176688 12934654 ~ 12936278 (+)
G1517457 NA other downstream 1179557 12937523 ~ 12942494 (+)
G1517545 NA other downstream 1429135 13187101 ~ 13188080 (+)

Expression


Co-expression Network