G1517101


Basic Information

Item Value
gene id G1517101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 11861372 ~ 11862045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736583
cggtgGTATAAATTATTTATTCACAAGATTGAAAAAGGGtaacatcatcatcataatcataaTGTTTCCATGTTGAGGTCCATCCGAGCCTATAGatattacattacagtactaacAGTCAAATAGTCCCATCGTGTTTCCTCCTCACAGTTTGTCTTCAGTGAGTCCTCAGGTCATTATCAATCCTGGACCTCTACAGCTTTCATAGTCAAATAGTGTCCTGCGTCTGCAAAGAGGTCTGGACCATTTTGGCACGTTGAGACACTTAGTAGGTTTGGAAGAGGATGGGTCGGATTAGATGAGTGAACAGAGGGGGTTTGTGGGTAGTGGTAAGTGTGTGACAAGCGGAGTGTGCTGTCTGTGCCGTATGTGTTAGATGAGGCTTGAAGCAGGGCGGCGCGTGCtgtctgtgttttctgtgtgtatatacagttgaagtctgaagtttacatacactttagccaaatacatttaaacaaaatttttcacaattcctgacattttatcctagtaaaaattccctgtcttaggtcagtcaccactttattttaagaatgtgaaatgtcagaataatagtagagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736583 True 584 lncRNA 0.40 2 11861372 11862045

Neighbor

gene id symbol gene type direction distance location
LOC118941095 LOC106575791 coding upstream 47140 11809043 ~ 11814232 (+)
trnas-cga-32 NA coding upstream 52382 11808909 ~ 11808990 (+)
LOC110495630 LOC106575789 coding upstream 52992 11803177 ~ 11808380 (+)
LOC118941042 LOC105005823 coding upstream 58634 11791601 ~ 11802738 (+)
LOC110495619 slc19a2 coding upstream 81502 11773114 ~ 11779870 (+)
LOC110497058 LOC106575722 coding downstream 23828 11885873 ~ 11926209 (+)
LOC110527250 LOC106575686 coding downstream 145909 12007954 ~ 12021342 (+)
zswim2 LOC106574814 coding downstream 176697 12038742 ~ 12045602 (+)
dytn LOC106574817 coding downstream 186934 12048979 ~ 12060014 (+)
LOC110538823 LOC105019738 coding downstream 207004 12069049 ~ 12080939 (+)
G1517060 NA non-coding upstream 20026 11838527 ~ 11841346 (+)
G1517095 NA non-coding upstream 23758 11837344 ~ 11837614 (+)
G1517065 rgn non-coding upstream 40954 11817355 ~ 11820418 (+)
G1517042 NA non-coding upstream 96615 11705552 ~ 11764757 (+)
G1517073 NA non-coding upstream 103406 11757256 ~ 11757966 (+)
G1517150 NA non-coding downstream 78017 11940062 ~ 11941897 (+)
G1517174 NA non-coding downstream 131657 11993702 ~ 11994943 (+)
G1517176 NA non-coding downstream 134256 11996301 ~ 11997659 (+)
G1517110 ef1b non-coding downstream 205339 12067384 ~ 12068234 (+)
G1517202 NA non-coding downstream 223845 12085890 ~ 12086420 (+)
G1517019 NA other upstream 217614 11642789 ~ 11643758 (+)
G1517015 NA other upstream 226393 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 768818 10978682 ~ 11092554 (+)
G1516637 NA other upstream 844283 11016765 ~ 11017089 (+)
G1516136 NA other upstream 1534234 10310107 ~ 10327138 (+)
G1517414 LOC106575752 other downstream 971606 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 1072609 12934654 ~ 12936278 (+)
G1517457 NA other downstream 1075478 12937523 ~ 12942494 (+)
G1517545 NA other downstream 1325056 13187101 ~ 13188080 (+)

Expression


Co-expression Network