Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517174 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 11993702 ~ 11994943 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736672 | False | 360 | lncRNA | 0.43 | 3 | 11993702 | 11994943 |
| TU1736670 | True | 409 | lncRNA | 0.43 | 2 | 11994514 | 11994943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497058 | LOC106575722 | coding | upstream | 67493 | 11885873 ~ 11926209 (+) |
| LOC118941095 | LOC106575791 | coding | upstream | 179470 | 11809043 ~ 11814232 (+) |
| trnas-cga-32 | NA | coding | upstream | 184712 | 11808909 ~ 11808990 (+) |
| LOC110495630 | LOC106575789 | coding | upstream | 185322 | 11803177 ~ 11808380 (+) |
| LOC118941042 | LOC105005823 | coding | upstream | 190964 | 11791601 ~ 11802738 (+) |
| LOC110527250 | LOC106575686 | coding | downstream | 13011 | 12007954 ~ 12021342 (+) |
| zswim2 | LOC106574814 | coding | downstream | 43799 | 12038742 ~ 12045602 (+) |
| dytn | LOC106574817 | coding | downstream | 54036 | 12048979 ~ 12060014 (+) |
| LOC110538823 | LOC105019738 | coding | downstream | 74106 | 12069049 ~ 12080939 (+) |
| LOC110527243 | LOC102778049 | coding | downstream | 98959 | 12093902 ~ 12161272 (+) |
| G1517150 | NA | non-coding | upstream | 51805 | 11940062 ~ 11941897 (+) |
| G1517101 | NA | non-coding | upstream | 131657 | 11861372 ~ 11862045 (+) |
| G1517060 | NA | non-coding | upstream | 152356 | 11838527 ~ 11841346 (+) |
| G1517095 | NA | non-coding | upstream | 156088 | 11837344 ~ 11837614 (+) |
| G1517065 | rgn | non-coding | upstream | 173284 | 11817355 ~ 11820418 (+) |
| G1517176 | NA | non-coding | downstream | 1358 | 11996301 ~ 11997659 (+) |
| G1517110 | ef1b | non-coding | downstream | 72441 | 12067384 ~ 12068234 (+) |
| G1517202 | NA | non-coding | downstream | 90947 | 12085890 ~ 12086420 (+) |
| G1517204 | NA | non-coding | downstream | 93727 | 12088670 ~ 12088910 (+) |
| G1517206 | NA | non-coding | downstream | 94444 | 12089387 ~ 12089608 (+) |
| G1517019 | NA | other | upstream | 349944 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 358723 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 901148 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 976613 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 838708 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 939711 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 942580 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 1192158 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 2439819 | 14434762 ~ 14436120 (+) |
