Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517229 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12201710 ~ 12202138 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736760 | True | 429 | lncRNA | 0.49 | 1 | 12201710 | 12202138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527243 | LOC102778049 | coding | upstream | 40438 | 12093902 ~ 12161272 (+) |
| LOC110538823 | LOC105019738 | coding | upstream | 120771 | 12069049 ~ 12080939 (+) |
| dytn | LOC106574817 | coding | upstream | 141696 | 12048979 ~ 12060014 (+) |
| zswim2 | LOC106574814 | coding | upstream | 156108 | 12038742 ~ 12045602 (+) |
| LOC110527250 | LOC106575686 | coding | upstream | 180368 | 12007954 ~ 12021342 (+) |
| LOC118941035 | LOC106592175 | coding | downstream | 12412 | 12214550 ~ 12216720 (+) |
| LOC110527236 | LOC106575759 | coding | downstream | 14576 | 12216714 ~ 12220754 (+) |
| LOC110527239 | iqcb1 | coding | downstream | 23247 | 12225385 ~ 12229990 (+) |
| LOC118941030 | LOC106574872 | coding | downstream | 49879 | 12252017 ~ 12260675 (+) |
| LOC110511883 | eed | coding | downstream | 73125 | 12275263 ~ 12281375 (+) |
| G1517206 | NA | non-coding | upstream | 112102 | 12089387 ~ 12089608 (+) |
| G1517204 | NA | non-coding | upstream | 112800 | 12088670 ~ 12088910 (+) |
| G1517202 | NA | non-coding | upstream | 115290 | 12085890 ~ 12086420 (+) |
| G1517110 | ef1b | non-coding | upstream | 133476 | 12067384 ~ 12068234 (+) |
| G1517230 | NA | non-coding | downstream | 153 | 12202291 ~ 12202577 (+) |
| G1517231 | NA | non-coding | downstream | 533 | 12202671 ~ 12202973 (+) |
| G1517233 | NA | non-coding | downstream | 2000 | 12204138 ~ 12205414 (+) |
| G1517116 | NA | non-coding | downstream | 43745 | 12245883 ~ 12246387 (+) |
| G1517254 | NA | non-coding | downstream | 70031 | 12272169 ~ 12272799 (+) |
| G1517150 | NA | other | upstream | 260605 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 557952 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 566731 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1109156 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 1184621 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 631513 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 732516 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 735385 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 984963 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 2232624 | 14434762 ~ 14436120 (+) |
