G1517256


Basic Information

Item Value
gene id G1517256
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12285296 ~ 12285618 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736800
gggggcagtagctcttcggctgcatcagattcacatcCATGCTAGCTGgtctaacaacaaatgtagaattactgatgctagcattggatgtgctcgtggaagcagaccAACTTGTTGTTGACAGGTGCAGgtgtagtactgctggtagtaacagtagagctggtatgtgtctatgGACACGGGCCTTTTTTAAATTTGACCATTTATCCATTTTccagcaaacggaatgagcagcagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736800 True 238 lncRNA 0.46 2 12285296 12285618

Neighbor

gene id symbol gene type direction distance location
LOC110511883 eed coding upstream 3921 12275263 ~ 12281375 (+)
LOC118941030 LOC106574872 coding upstream 24621 12252017 ~ 12260675 (+)
LOC110527239 iqcb1 coding upstream 55306 12225385 ~ 12229990 (+)
LOC110527236 LOC106575759 coding upstream 64542 12216714 ~ 12220754 (+)
LOC118941035 LOC106592175 coding upstream 68576 12214550 ~ 12216720 (+)
LOC110495539 LOC106575646 coding downstream 1863 12287481 ~ 12308672 (+)
LOC118941037 NA coding downstream 23337 12308955 ~ 12317593 (+)
LOC110495542 LOC105019723 coding downstream 33172 12318790 ~ 12330568 (+)
LOC118941038 LOC106574879 coding downstream 58077 12343695 ~ 12344858 (+)
LOC110495532 LOC106574868 coding downstream 95807 12381425 ~ 12385624 (+)
G1517254 NA non-coding upstream 12497 12272169 ~ 12272799 (+)
G1517116 NA non-coding upstream 38909 12245883 ~ 12246387 (+)
G1517233 NA non-coding upstream 79882 12204138 ~ 12205414 (+)
G1517231 NA non-coding upstream 82323 12202671 ~ 12202973 (+)
G1517230 NA non-coding upstream 82719 12202291 ~ 12202577 (+)
G1517274 NA non-coding downstream 60828 12346446 ~ 12348016 (+)
G1517276 NA non-coding downstream 68478 12354096 ~ 12356750 (+)
G1517278 NA non-coding downstream 72297 12357915 ~ 12359042 (+)
G1517279 NA non-coding downstream 73761 12359379 ~ 12360709 (+)
G1517277 LOC106575774 non-coding downstream 79688 12365306 ~ 12366088 (+)
G1517150 NA other upstream 344191 11940062 ~ 11941897 (+)
G1517019 NA other upstream 641538 11642789 ~ 11643758 (+)
G1517015 NA other upstream 650317 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1192742 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1268207 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 548033 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 649036 12934654 ~ 12936278 (+)
G1517457 NA other downstream 651905 12937523 ~ 12942494 (+)
G1517545 NA other downstream 901483 13187101 ~ 13188080 (+)
G1519096 NA other downstream 2149144 14434762 ~ 14436120 (+)

Expression


Co-expression Network