Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517312 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12419369 ~ 12419744 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736877 | True | 376 | lncRNA | 0.36 | 1 | 12419369 | 12419744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513922 | stk16 | coding | upstream | 3891 | 12404859 ~ 12415478 (+) |
| LOC110527229 | tuba8l2 | coding | upstream | 15336 | 12390243 ~ 12404033 (+) |
| LOC110495532 | LOC106574868 | coding | upstream | 33745 | 12381425 ~ 12385624 (+) |
| LOC118941038 | LOC106574879 | coding | upstream | 74511 | 12343695 ~ 12344858 (+) |
| LOC110495542 | LOC105019723 | coding | upstream | 88801 | 12318790 ~ 12330568 (+) |
| LOC118941034 | LOC106575710 | coding | downstream | 28818 | 12448562 ~ 12454072 (+) |
| LOC110527226 | LOC106575709 | coding | downstream | 40265 | 12460009 ~ 12467899 (+) |
| LOC110512988 | LOC106575668 | coding | downstream | 122520 | 12542264 ~ 12545786 (+) |
| LOC110527217 | LOC106575668 | coding | downstream | 129911 | 12549655 ~ 12552772 (+) |
| LOC110527211 | ipo5 | coding | downstream | 132829 | 12552573 ~ 12569425 (+) |
| G1517311 | NA | non-coding | upstream | 1147 | 12417916 ~ 12418222 (+) |
| G1517302 | NA | non-coding | upstream | 26008 | 12391778 ~ 12393361 (+) |
| G1517284 | LOC106575774 | non-coding | upstream | 43081 | 12367547 ~ 12376288 (+) |
| G1517277 | LOC106575774 | non-coding | upstream | 53281 | 12365306 ~ 12366088 (+) |
| G1517318 | NA | non-coding | downstream | 19450 | 12439194 ~ 12439407 (+) |
| G1517321 | NA | non-coding | downstream | 49280 | 12469024 ~ 12469491 (+) |
| G1517323 | NA | non-coding | downstream | 87359 | 12507103 ~ 12507368 (+) |
| G1517326 | NA | non-coding | downstream | 89867 | 12509611 ~ 12509868 (+) |
| G1517330 | NA | non-coding | downstream | 105503 | 12525247 ~ 12525550 (+) |
| G1517150 | NA | other | upstream | 478264 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 775611 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 784390 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1326815 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 1402280 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 413907 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 514910 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 517779 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 767357 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 2015018 | 14434762 ~ 14436120 (+) |
