G1517318


Basic Information

Item Value
gene id G1517318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12439194 ~ 12439407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736883
TTCAGTGTTGTAACACTGTGCAAATAgttgaaagggaaaataaatcaacaggttgtgtttacatggtgtgtgttcttcactagTTGCCCGTTTCTCGTggtaacaggtcacacatcttactGCTGTGATGGAATACTGctatttcacctaatagatatgggagtttatcaagattggatttgttttcaaattctttgtgggtctgtgtaatctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736883 True 214 lncRNA 0.38 1 12439194 12439407

Neighbor

gene id symbol gene type direction distance location
LOC110513922 stk16 coding upstream 23716 12404859 ~ 12415478 (+)
LOC110527229 tuba8l2 coding upstream 35161 12390243 ~ 12404033 (+)
LOC110495532 LOC106574868 coding upstream 53570 12381425 ~ 12385624 (+)
LOC118941038 LOC106574879 coding upstream 94336 12343695 ~ 12344858 (+)
LOC110495542 LOC105019723 coding upstream 108626 12318790 ~ 12330568 (+)
LOC118941034 LOC106575710 coding downstream 9155 12448562 ~ 12454072 (+)
LOC110527226 LOC106575709 coding downstream 20602 12460009 ~ 12467899 (+)
LOC110512988 LOC106575668 coding downstream 102857 12542264 ~ 12545786 (+)
LOC110527217 LOC106575668 coding downstream 110248 12549655 ~ 12552772 (+)
LOC110527211 ipo5 coding downstream 113166 12552573 ~ 12569425 (+)
G1517312 NA non-coding upstream 19450 12419369 ~ 12419744 (+)
G1517311 NA non-coding upstream 20972 12417916 ~ 12418222 (+)
G1517302 NA non-coding upstream 45833 12391778 ~ 12393361 (+)
G1517284 LOC106575774 non-coding upstream 62906 12367547 ~ 12376288 (+)
G1517321 NA non-coding downstream 29617 12469024 ~ 12469491 (+)
G1517323 NA non-coding downstream 67696 12507103 ~ 12507368 (+)
G1517326 NA non-coding downstream 70204 12509611 ~ 12509868 (+)
G1517330 NA non-coding downstream 85840 12525247 ~ 12525550 (+)
G1517353 NA non-coding downstream 278675 12718082 ~ 12718713 (+)
G1517150 NA other upstream 498089 11940062 ~ 11941897 (+)
G1517019 NA other upstream 795436 11642789 ~ 11643758 (+)
G1517015 NA other upstream 804215 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1346640 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1422105 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 394244 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 495247 12934654 ~ 12936278 (+)
G1517457 NA other downstream 498116 12937523 ~ 12942494 (+)
G1517545 NA other downstream 747694 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1995355 14434762 ~ 14436120 (+)

Expression


Co-expression Network