Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517321 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12469024 ~ 12469491 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736890 | True | 468 | lncRNA | 0.41 | 1 | 12469024 | 12469491 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527226 | LOC106575709 | coding | upstream | 1125 | 12460009 ~ 12467899 (+) |
| LOC118941034 | LOC106575710 | coding | upstream | 14952 | 12448562 ~ 12454072 (+) |
| LOC110513922 | stk16 | coding | upstream | 53546 | 12404859 ~ 12415478 (+) |
| LOC110527229 | tuba8l2 | coding | upstream | 64991 | 12390243 ~ 12404033 (+) |
| LOC110495532 | LOC106574868 | coding | upstream | 83400 | 12381425 ~ 12385624 (+) |
| LOC110512988 | LOC106575668 | coding | downstream | 72773 | 12542264 ~ 12545786 (+) |
| LOC110527217 | LOC106575668 | coding | downstream | 80164 | 12549655 ~ 12552772 (+) |
| LOC110527211 | ipo5 | coding | downstream | 83082 | 12552573 ~ 12569425 (+) |
| LOC110527213 | LOC106575703 | coding | downstream | 102420 | 12571911 ~ 12600335 (+) |
| LOC110497019 | LOC106574742 | coding | downstream | 131332 | 12600823 ~ 12610380 (+) |
| G1517318 | NA | non-coding | upstream | 29617 | 12439194 ~ 12439407 (+) |
| G1517312 | NA | non-coding | upstream | 49280 | 12419369 ~ 12419744 (+) |
| G1517311 | NA | non-coding | upstream | 50802 | 12417916 ~ 12418222 (+) |
| G1517302 | NA | non-coding | upstream | 75663 | 12391778 ~ 12393361 (+) |
| G1517323 | NA | non-coding | downstream | 37612 | 12507103 ~ 12507368 (+) |
| G1517326 | NA | non-coding | downstream | 40120 | 12509611 ~ 12509868 (+) |
| G1517330 | NA | non-coding | downstream | 55756 | 12525247 ~ 12525550 (+) |
| G1517353 | NA | non-coding | downstream | 248591 | 12718082 ~ 12718713 (+) |
| G1517386 | NA | non-coding | downstream | 249284 | 12718775 ~ 12718999 (+) |
| G1517150 | NA | other | upstream | 527919 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 825266 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 834045 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1376470 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 1451935 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 364160 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 465163 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 468032 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 717610 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 1965271 | 14434762 ~ 14436120 (+) |
