G1517330


Basic Information

Item Value
gene id G1517330
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12525247 ~ 12525550 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736899
tggctttgttatggaaggtttgggaatcgcttcttttaggtgtttgtagaatttaacggctcttttctggattttgataattagcgggtatcggcctaattctgctctgcatgcattatttggtgttctatgttgtacacggaggatatttctgcagaattctgcatgcagagtctcaatttggtgtttgtcccattttgtgaattcttggttggtgagcggacaccagacctcacaaccataaagggcattgggttctataactgattcaagtatttttagccagatcctaattagtatgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736899 True 304 lncRNA 0.40 1 12525247 12525550

Neighbor

gene id symbol gene type direction distance location
LOC110527226 LOC106575709 coding upstream 57348 12460009 ~ 12467899 (+)
LOC118941034 LOC106575710 coding upstream 71175 12448562 ~ 12454072 (+)
LOC110513922 stk16 coding upstream 109769 12404859 ~ 12415478 (+)
LOC110527229 tuba8l2 coding upstream 121214 12390243 ~ 12404033 (+)
LOC110495532 LOC106574868 coding upstream 139623 12381425 ~ 12385624 (+)
LOC110512988 LOC106575668 coding downstream 16714 12542264 ~ 12545786 (+)
LOC110527217 LOC106575668 coding downstream 24105 12549655 ~ 12552772 (+)
LOC110527211 ipo5 coding downstream 27023 12552573 ~ 12569425 (+)
LOC110527213 LOC106575703 coding downstream 46361 12571911 ~ 12600335 (+)
LOC110497019 LOC106574742 coding downstream 75273 12600823 ~ 12610380 (+)
G1517326 NA non-coding upstream 15379 12509611 ~ 12509868 (+)
G1517323 NA non-coding upstream 17879 12507103 ~ 12507368 (+)
G1517321 NA non-coding upstream 55756 12469024 ~ 12469491 (+)
G1517318 NA non-coding upstream 85840 12439194 ~ 12439407 (+)
G1517312 NA non-coding upstream 105503 12419369 ~ 12419744 (+)
G1517353 NA non-coding downstream 192532 12718082 ~ 12718713 (+)
G1517386 NA non-coding downstream 193225 12718775 ~ 12718999 (+)
G1517408 NA non-coding downstream 238411 12763961 ~ 12765207 (+)
G1517409 NA non-coding downstream 248662 12774212 ~ 12785975 (+)
G1517410 NA non-coding downstream 263995 12789545 ~ 12805543 (+)
G1517150 NA other upstream 584142 11940062 ~ 11941897 (+)
G1517019 NA other upstream 881489 11642789 ~ 11643758 (+)
G1517015 NA other upstream 890268 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1432693 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1508158 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 308101 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 409104 12934654 ~ 12936278 (+)
G1517457 NA other downstream 411973 12937523 ~ 12942494 (+)
G1517545 NA other downstream 661551 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1909212 14434762 ~ 14436120 (+)

Expression


Co-expression Network