G1517353


Basic Information

Item Value
gene id G1517353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12718082 ~ 12718713 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736924
agaacaatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcaattacagctgtaagtcgcttggggtatgtctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatgtgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatgttcctgtatttggctccatccatcttcccatcaattttaacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736924 True 632 lncRNA 0.40 1 12718082 12718713

Neighbor

gene id symbol gene type direction distance location
LOC110497015 tmem131 coding upstream 64326 12622325 ~ 12653756 (+)
LOC110497019 LOC106574742 coding upstream 107702 12600823 ~ 12610380 (+)
LOC110527213 LOC106575703 coding upstream 117747 12571911 ~ 12600335 (+)
LOC110527211 ipo5 coding upstream 148657 12552573 ~ 12569425 (+)
LOC110527217 LOC106575668 coding upstream 165310 12549655 ~ 12552772 (+)
LOC110527205 pcid2 coding downstream 31210 12749923 ~ 12829550 (+)
LOC110495518 LOC106574650 coding downstream 155764 12874477 ~ 12879111 (+)
LOC110495515 creg1 coding downstream 163798 12882511 ~ 12885631 (+)
cd3z cd3z coding downstream 167382 12886095 ~ 12898735 (+)
gp91phox cybb coding downstream 356351 13075064 ~ 13080819 (+)
G1517330 NA non-coding upstream 192532 12525247 ~ 12525550 (+)
G1517326 NA non-coding upstream 208214 12509611 ~ 12509868 (+)
G1517323 NA non-coding upstream 210714 12507103 ~ 12507368 (+)
G1517321 NA non-coding upstream 248591 12469024 ~ 12469491 (+)
G1517318 NA non-coding upstream 278675 12439194 ~ 12439407 (+)
G1517386 NA non-coding downstream 62 12718775 ~ 12718999 (+)
G1517408 NA non-coding downstream 45248 12763961 ~ 12765207 (+)
G1517409 NA non-coding downstream 55499 12774212 ~ 12785975 (+)
G1517410 NA non-coding downstream 70832 12789545 ~ 12805543 (+)
G1517417 LOC106575738 non-coding downstream 122670 12841383 ~ 12854300 (+)
G1517150 NA other upstream 776977 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1074324 11642789 ~ 11643758 (+)
G1517015 NA other upstream 1083103 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1625528 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1700993 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 114938 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 215941 12934654 ~ 12936278 (+)
G1517457 NA other downstream 218810 12937523 ~ 12942494 (+)
G1517545 NA other downstream 468388 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1716049 14434762 ~ 14436120 (+)

Expression


Co-expression Network