G1517386


Basic Information

Item Value
gene id G1517386
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12718775 ~ 12718999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1736957
tgggtatggtgtgttcagggtgaagagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatata

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1736957 True 225 lncRNA 0.42 1 12718775 12718999

Neighbor

gene id symbol gene type direction distance location
LOC110497015 tmem131 coding upstream 65019 12622325 ~ 12653756 (+)
LOC110497019 LOC106574742 coding upstream 108395 12600823 ~ 12610380 (+)
LOC110527213 LOC106575703 coding upstream 118440 12571911 ~ 12600335 (+)
LOC110527211 ipo5 coding upstream 149350 12552573 ~ 12569425 (+)
LOC110527217 LOC106575668 coding upstream 166003 12549655 ~ 12552772 (+)
LOC110527205 pcid2 coding downstream 30924 12749923 ~ 12829550 (+)
LOC110495518 LOC106574650 coding downstream 155478 12874477 ~ 12879111 (+)
LOC110495515 creg1 coding downstream 163512 12882511 ~ 12885631 (+)
cd3z cd3z coding downstream 167096 12886095 ~ 12898735 (+)
gp91phox cybb coding downstream 356065 13075064 ~ 13080819 (+)
G1517353 NA non-coding upstream 62 12718082 ~ 12718713 (+)
G1517330 NA non-coding upstream 193225 12525247 ~ 12525550 (+)
G1517326 NA non-coding upstream 208907 12509611 ~ 12509868 (+)
G1517323 NA non-coding upstream 211407 12507103 ~ 12507368 (+)
G1517321 NA non-coding upstream 249284 12469024 ~ 12469491 (+)
G1517408 NA non-coding downstream 44962 12763961 ~ 12765207 (+)
G1517409 NA non-coding downstream 55213 12774212 ~ 12785975 (+)
G1517410 NA non-coding downstream 70546 12789545 ~ 12805543 (+)
G1517417 LOC106575738 non-coding downstream 122384 12841383 ~ 12854300 (+)
G1517422 NA non-coding downstream 137515 12856514 ~ 12877270 (+)
G1517150 NA other upstream 777670 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1075017 11642789 ~ 11643758 (+)
G1517015 NA other upstream 1083796 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1626221 10978682 ~ 11092554 (+)
G1516637 NA other upstream 1701686 11016765 ~ 11017089 (+)
G1517414 LOC106575752 other downstream 114652 12833651 ~ 12872163 (+)
G1517456 LOC106575727 other downstream 215655 12934654 ~ 12936278 (+)
G1517457 NA other downstream 218524 12937523 ~ 12942494 (+)
G1517545 NA other downstream 468102 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1715763 14434762 ~ 14436120 (+)

Expression


Co-expression Network