Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517409 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12774212 ~ 12785975 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736980 | False | 367 | lncRNA | 0.26 | 2 | 12774212 | 12780369 |
| TU1736981 | False | 429 | lncRNA | 0.26 | 3 | 12774212 | 12785975 |
| TU1736982 | True | 391 | lncRNA | 0.25 | 2 | 12783562 | 12785975 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497015 | tmem131 | coding | upstream | 120456 | 12622325 ~ 12653756 (+) |
| LOC110497019 | LOC106574742 | coding | upstream | 163832 | 12600823 ~ 12610380 (+) |
| LOC110527213 | LOC106575703 | coding | upstream | 173877 | 12571911 ~ 12600335 (+) |
| LOC110527211 | ipo5 | coding | upstream | 204787 | 12552573 ~ 12569425 (+) |
| LOC110527217 | LOC106575668 | coding | upstream | 221440 | 12549655 ~ 12552772 (+) |
| LOC110495518 | LOC106574650 | coding | downstream | 88502 | 12874477 ~ 12879111 (+) |
| LOC110495515 | creg1 | coding | downstream | 96536 | 12882511 ~ 12885631 (+) |
| cd3z | cd3z | coding | downstream | 100120 | 12886095 ~ 12898735 (+) |
| gp91phox | cybb | coding | downstream | 289089 | 13075064 ~ 13080819 (+) |
| LOC110495507 | LOC106574647 | coding | downstream | 316654 | 13102629 ~ 13132209 (+) |
| G1517408 | NA | non-coding | upstream | 9005 | 12763961 ~ 12765207 (+) |
| G1517386 | NA | non-coding | upstream | 55213 | 12718775 ~ 12718999 (+) |
| G1517353 | NA | non-coding | upstream | 55499 | 12718082 ~ 12718713 (+) |
| G1517330 | NA | non-coding | upstream | 248662 | 12525247 ~ 12525550 (+) |
| G1517326 | NA | non-coding | upstream | 264344 | 12509611 ~ 12509868 (+) |
| G1517410 | NA | non-coding | downstream | 3570 | 12789545 ~ 12805543 (+) |
| G1517417 | LOC106575738 | non-coding | downstream | 55408 | 12841383 ~ 12854300 (+) |
| G1517422 | NA | non-coding | downstream | 70539 | 12856514 ~ 12877270 (+) |
| G1517420 | LOC106574661 | non-coding | downstream | 78555 | 12864530 ~ 12865350 (+) |
| G1517418 | NA | non-coding | downstream | 94761 | 12880736 ~ 12881992 (+) |
| G1517150 | NA | other | upstream | 833107 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 1130454 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 1139233 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1681658 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 1757123 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 47676 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 148679 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 151548 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 401126 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 1648787 | 14434762 ~ 14436120 (+) |
