Gene
RNA
| Item | Value |
|---|---|
| gene id | G1517410 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 12789545 ~ 12805543 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1736983 | False | 282 | lncRNA | 0.26 | 2 | 12789545 | 12805543 |
| TU1736984 | True | 282 | lncRNA | 0.26 | 2 | 12795312 | 12805543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497015 | tmem131 | coding | upstream | 135789 | 12622325 ~ 12653756 (+) |
| LOC110497019 | LOC106574742 | coding | upstream | 179165 | 12600823 ~ 12610380 (+) |
| LOC110527213 | LOC106575703 | coding | upstream | 189210 | 12571911 ~ 12600335 (+) |
| LOC110527211 | ipo5 | coding | upstream | 220120 | 12552573 ~ 12569425 (+) |
| LOC110527217 | LOC106575668 | coding | upstream | 236773 | 12549655 ~ 12552772 (+) |
| LOC110495518 | LOC106574650 | coding | downstream | 68934 | 12874477 ~ 12879111 (+) |
| LOC110495515 | creg1 | coding | downstream | 76968 | 12882511 ~ 12885631 (+) |
| cd3z | cd3z | coding | downstream | 80552 | 12886095 ~ 12898735 (+) |
| gp91phox | cybb | coding | downstream | 269521 | 13075064 ~ 13080819 (+) |
| LOC110495507 | LOC106574647 | coding | downstream | 297086 | 13102629 ~ 13132209 (+) |
| G1517409 | NA | non-coding | upstream | 3570 | 12774212 ~ 12785975 (+) |
| G1517408 | NA | non-coding | upstream | 24338 | 12763961 ~ 12765207 (+) |
| G1517386 | NA | non-coding | upstream | 70546 | 12718775 ~ 12718999 (+) |
| G1517353 | NA | non-coding | upstream | 70832 | 12718082 ~ 12718713 (+) |
| G1517330 | NA | non-coding | upstream | 263995 | 12525247 ~ 12525550 (+) |
| G1517417 | LOC106575738 | non-coding | downstream | 35840 | 12841383 ~ 12854300 (+) |
| G1517422 | NA | non-coding | downstream | 50971 | 12856514 ~ 12877270 (+) |
| G1517420 | LOC106574661 | non-coding | downstream | 58987 | 12864530 ~ 12865350 (+) |
| G1517418 | NA | non-coding | downstream | 75193 | 12880736 ~ 12881992 (+) |
| G1517416 | NA | non-coding | downstream | 93267 | 12898810 ~ 12902980 (+) |
| G1517150 | NA | other | upstream | 848440 | 11940062 ~ 11941897 (+) |
| G1517019 | NA | other | upstream | 1145787 | 11642789 ~ 11643758 (+) |
| G1517015 | NA | other | upstream | 1154566 | 11633067 ~ 11634979 (+) |
| LOC118941092 | LOC106575823 | other | upstream | 1696991 | 10978682 ~ 11092554 (+) |
| G1516637 | NA | other | upstream | 1772456 | 11016765 ~ 11017089 (+) |
| G1517414 | LOC106575752 | other | downstream | 28108 | 12833651 ~ 12872163 (+) |
| G1517456 | LOC106575727 | other | downstream | 129111 | 12934654 ~ 12936278 (+) |
| G1517457 | NA | other | downstream | 131980 | 12937523 ~ 12942494 (+) |
| G1517545 | NA | other | downstream | 381558 | 13187101 ~ 13188080 (+) |
| G1519096 | NA | other | downstream | 1629219 | 14434762 ~ 14436120 (+) |
