G1517456 (LOC106575727)


Basic Information

Item Value
gene id G1517456
gene name LOC106575727
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 12934654 ~ 12936278 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1737033
TCTCTTGGTCTGGGTGTTCAGATCTTTGGTGTGCTCCACTGTTCTCTAAATGCAGGCTAACTTCTGCCAGGGCCTCAGAACGGCTATGACTGGTCTCAGTGAAGTACAACTGCTATTCTTGCATTCGTCAAACTTTTCACCTAAATCCAATTAAATGAGTTCACAGAGCCCTAAAACCTGACTGTTAAAAATCGAAGCGTCTTTCACAGAGTGGTTGGTCATTAATTCTACATCCAACAACAAGAGAGTTCGCAGGCATTATTATCTAACAAGATTGGACCGAAGAACAGGTGAGTATATTGACCTTTCAGTGACTCAGTCCACACAACAACAGTTGTAGTTCTACAGAGAATCTATTGTTATTGTTCAAGACACTttgcaagtttttttttttttttcatcttgTCAGATTTTCTGCGTCAAAAGGAATCCATCTTGTATCCCGACCTCGGTTCTGCTCTGAAAGAAAACCTCACAGTCAAATGCTGCATCTCTGATTCCCCGCAGAGAGAATGTAGTCAGAACATGGTCCCTGCCATATCAGCAGTGGATAGAGGTGGCAGCAGTGTCTGTCCAGCAGTGTCACTGTCATTTGGCAggcaagggaggggggggggggggggggggtagacacaAAGGACTCATGTCCCAGGCCGGTGCACTCACAAAAACACATCATTATGTTAGTATATTAAGGAGGTATATAAAAAGGTCCATCCATGAGTTAACATCCTCATTTTAGCCTGGAGTAATtcctgttgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgagtatgtgTGCTAACTGGTCACACCATGTTGCCCTGTGTGCCAGTGGTTCCAGGCAGTAAAGGCACAGCCACTTCACTCTGCTCcacactctctgtctccacctctgtctctACCACTGTCTCTCCCGGAGCACTCCTGTTGGCTACTGCCTCCATCTTCTTAGCCAGGTAGTCATCTAACTGGCTGCTCTTCTCCAGCCCTCCTTCCTCTAGCTCCTCCTCCAGCTGTACATAGGGGCTGTGTTTCAGGTGGTTGGGCAGGCAGGGCACCAGATGCACTTGTCCGTTGTCACCCAGCATGTTCACGCACGTGTAGAAGCCCTGGGTGGATGATGGGGGTGGGGCCTGCTGGTCCGGAGGCGGGACAGGGGTGGGATCCACCATCATGCTGTAGTCAGTGCCCGGGAAGACCAGAAGCTCTGACTGGTCGGGGTTTGCTGTTGGCCATTCCCACGGGGTCGGGAAGGCTTCCACTGGAGCCTGACAGTAAGGGGCGGGGACTGGGGTGTAAGAGGCGGGGACTGGGGTATAAGGGGCGTGGCTGGAGGTGGTCTGGACCAGTAGTTGGCTGTGGATGGCCATATCATAATCCTCCTTCCGGACTGCTAGGATCCCCAGGGGAGCCTGGAGAGACTGGTTGTTGTCCATGCTGACAGAGTCCCAGACCTCCTCCTCGCTGTAGCTTGGGGGCTTATAGCCATGGAAGGAGATGAAATGACGGTTGATCTCATCAAAGCCCCCTTtctgagagagaaggaaggaggagaaagaTGAA

Function

NR:

description
prolactin receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1737033 True 1573 TUCP 0.51 2 12934654 12936278

Neighbor

gene id symbol gene type direction distance location
cd3z cd3z coding upstream 35919 12886095 ~ 12898735 (+)
LOC110495515 creg1 coding upstream 49023 12882511 ~ 12885631 (+)
LOC110495518 LOC106574650 coding upstream 55543 12874477 ~ 12879111 (+)
LOC110527205 pcid2 coding upstream 105104 12749923 ~ 12829550 (+)
LOC110497015 tmem131 coding upstream 280898 12622325 ~ 12653756 (+)
gp91phox cybb coding downstream 138786 13075064 ~ 13080819 (+)
LOC110495507 LOC106574647 coding downstream 166351 13102629 ~ 13132209 (+)
LOC118941099 LOC106574646 coding downstream 196839 13133117 ~ 13134843 (+)
LOC118941100 NA coding downstream 453751 13390029 ~ 13392754 (+)
LOC118941043 NA coding downstream 513879 13450157 ~ 13451678 (+)
G1517454 NA non-coding upstream 4686 12928924 ~ 12929968 (+)
G1517452 NA non-coding upstream 10018 12924399 ~ 12924636 (+)
G1517416 NA non-coding upstream 31674 12898810 ~ 12902980 (+)
G1517418 NA non-coding upstream 52662 12880736 ~ 12881992 (+)
G1517422 NA non-coding upstream 57384 12856514 ~ 12877270 (+)
G1517458 NA non-coding downstream 11093 12947371 ~ 12956518 (+)
G1517459 LOC106575727 non-coding downstream 12029 12948307 ~ 12948739 (+)
G1517465 NA non-coding downstream 23863 12960141 ~ 12980331 (+)
G1517467 NA non-coding downstream 26051 12962329 ~ 12968558 (+)
G1517468 NA non-coding downstream 27937 12964215 ~ 12970187 (+)
G1517414 LOC106575752 other upstream 62491 12833651 ~ 12872163 (+)
G1517150 NA other upstream 993549 11940062 ~ 11941897 (+)
G1517019 NA other upstream 1290896 11642789 ~ 11643758 (+)
G1517015 NA other upstream 1299675 11633067 ~ 11634979 (+)
LOC118941092 LOC106575823 other upstream 1842100 10978682 ~ 11092554 (+)
G1517457 NA other downstream 1245 12937523 ~ 12942494 (+)
G1517545 NA other downstream 250823 13187101 ~ 13188080 (+)
G1519096 NA other downstream 1498484 14434762 ~ 14436120 (+)
G1519538 NA other downstream 1562508 14498786 ~ 14499137 (+)
LOC110495481 LOC106574739 other downstream 1620048 14556326 ~ 14558589 (+)

Expression


Co-expression Network